Gene Cagg_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2166 
Symbol 
ID7266739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2658755 
End bp2659420 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content54% 
IMG OID643566997 
ProductEndopeptidase Clp 
Protein accessionYP_002463485 
Protein GI219849052 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.223886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGT CAACGCGCTA TAGCCACGAA TGGCGCAGTA TGCCGAGTCC GGAATGGCTT 
TCGCAACGAC CGGAATTGCT CATTCCGATG GTTGTTGAGA GTACCAGCCG CGGCGAACGC
GCTTTTGATA TCTATTCACG GTTGTTAAAA GAGCGGATCG TCATACTGGG AACGCCGATC
GACGATCAGA TCGCTAATCT GATCGTTGCA CAGTTGCTGT TCCTTGAGAG TGAAGATCCC
GATCGCGATA TTTGGCTCTA CATCAATAGT CCGGGTGGAT CGGTCACCGC TGGTCTCGGC
ATCTACGATA CAATGCACCA CATCCGTCCT GATGTGGCGA CAGTTTGTGT CGGGATGGCC
GGGAGTATGG CAACCCCGAT TTTGGCCGGT GGTGCTAAGG GTAAGCGCTA CAGCCTGCCG
CACTCAACGA TCCATATGCA CCCGGCGGGC GGTGGTGCAC GCGGCTATGC ACCAGATGTC
GAGATTATGG CACGTGAGTT GCTCCGCCTA CAACAATTGG TGCGGGAGCT GCTGGCTAAA
GATACCGGCC AACCGATTGA ACGGATTGCC AAAGACTTCG ACCGCGACTT ATTCATGACG
CCGGAACAGG CGAAAGAGTA CGGTATTATC GATGAAATCC TCATTCGTGA GGATGTGAAG
AAGTGA
 
Protein sequence
MNWSTRYSHE WRSMPSPEWL SQRPELLIPM VVESTSRGER AFDIYSRLLK ERIVILGTPI 
DDQIANLIVA QLLFLESEDP DRDIWLYINS PGGSVTAGLG IYDTMHHIRP DVATVCVGMA
GSMATPILAG GAKGKRYSLP HSTIHMHPAG GGARGYAPDV EIMARELLRL QQLVRELLAK
DTGQPIERIA KDFDRDLFMT PEQAKEYGII DEILIREDVK K