Gene Cagg_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2080 
Symbol 
ID7266981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2544068 
End bp2545180 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content56% 
IMG OID643566915 
Productglycosyl transferase group 1 
Protein accessionYP_002463404 
Protein GI219848971 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.937397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCACG TATTGCTCAC CGTTTCAGGG GTGATCCCAA ACAATATTGA ACAACAGATT 
GCTGCCGGTC GTCGCCCACG TGCCGATTAT CTTGAACTAG CCCGTCATTT CGGTGCCGAT
CTCCTCGATT ACCGAACGGC ACGGGCAACG AGTGGTATCG TCGGTCGGCT GTTCGAGCGG
CTAGGTGGGC CAAATCTGAT GTTGGCGTGG GCGTGTTTTA GCCGTCGCCA TCGCTATCAA
GCGATTTTCA CCGACGGTGA GCAGGTGGGG TTGCCGCTCG CGGCATTGCT CAAGTTTTTC
AGCCCCAATC GCCGTCCCCG CCACCTGATG ATCGTGCATA TTCTGTCGGT TCCCAAGAAA
ATGATCTTTC TTGATCGATT TGGCGTACAT AGTCATATCG ACCGCTTCAT CGTCTATTCG
ACGTGGCAGC AGCGTTTTAT CACCGAGCGC TGGCAGGTGC CGAAGCAACG GGTGCCGTTC
ACTCCGTTCA TGGTTGACGA TCAATTTTTT CATCCGCGTT ATGCGCCGCC CCGTCCCACC
AACCGTCCAC AGATTTGTGC AGTTGGTCTC GAACGGCGCG ACTACCCGAC CCTGTTGCGC
GCCGTGACCG GTCTCAACGC TGATGTGGTG GTGGCCGCCG CTAGCCCGTG GTCGAAGCAA
CGTAATAGTA CGCAAGGCCA ACCGATTCCG CCCAACGTGC AGGTGCAGAA GTTTAGCCAG
TACGATTTGC GTCAACTCTA CAGTGATAGC CGGTTTTTGG TCATGCCGCT CGAACCGGTT
GAGTTCCAAG CCGGCGTGAC GGCTATTCTT GAGGCAATGG CGATGGAGCG GGCGGTCATC
TGTACGCGCA CGCCCGGCCA AACCGATGTG GTGGTTGAGG GTGAAACCGG GTTGTACGTA
CCACCACGCG ATCCAGAGGC TTTGCGATCT GCCATCGAAC GGCTCTTAGC CGATCCAGAC
AGAGCGGCGC GGATGGGCCG GGCTGGTAGA CGTCTGATCG AGACTACGAT GAATCTTGAT
CATTACGCTG TGAGATTGAC CGATATTCTC TACGAGACGA TAAGTGAGAC CGGGGTTGAT
CTGCCACCGT TGCAGCCAAA GGAGCGGTTA TGA
 
Protein sequence
MNHVLLTVSG VIPNNIEQQI AAGRRPRADY LELARHFGAD LLDYRTARAT SGIVGRLFER 
LGGPNLMLAW ACFSRRHRYQ AIFTDGEQVG LPLAALLKFF SPNRRPRHLM IVHILSVPKK
MIFLDRFGVH SHIDRFIVYS TWQQRFITER WQVPKQRVPF TPFMVDDQFF HPRYAPPRPT
NRPQICAVGL ERRDYPTLLR AVTGLNADVV VAAASPWSKQ RNSTQGQPIP PNVQVQKFSQ
YDLRQLYSDS RFLVMPLEPV EFQAGVTAIL EAMAMERAVI CTRTPGQTDV VVEGETGLYV
PPRDPEALRS AIERLLADPD RAARMGRAGR RLIETTMNLD HYAVRLTDIL YETISETGVD
LPPLQPKERL