Gene Cagg_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1988 
Symbol 
ID7268904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2427841 
End bp2428641 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID643566819 
Productglycosyl transferase, WecB/TagA/CpsF family 
Protein accessionYP_002463312 
Protein GI219848879 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.895055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0062564 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGATA AAGGCAAATA CAATCTATTA GGTGTTCTTA TCAATGCCAT TGATTACGAT 
GCAGCAGTTA ACCGCGTATT AACTGCTGCC CATCATTGTC AACCACTCAC CCTATCGGCT
CTTGCTGTGC ATGGCGTAAT GACCGGCGTG CTAGACGCTG AGCAACGTTA CCGACTCAAC
CATCTCGATA TTGTTGTACC CGATGGGCAA CCGGTACGCT GGGCGCTAAA CCTCCTTTAT
CACCTCGGCC TCAGTGAACG CGTTTACGGA CCGACTCTGA TGCTACGCAT CTGTGAACGA
GCAAGTCTCG AGGGACTACC GATCTACTTA TACGGCAGTC GCCCTCAGGT GCTACAACAG
CTCTGTAACA ATCTACGGCA GCGATTTCCG CGTCTTATTA TTGCCGGAGC ACAGCCCTCA
CAATTTCGCC GACTGACTGC GGAAGAACAG CAGGCTATCG CTGCTCATAT CAGAACCAGC
GGGGCTGCCA TAACTTTCGT TGGATTAGGC TGTCCTCGAC AAGAGGTATG GGCTTACGAA
CACCGCGATT TGTTATCGAT GCCGATTATC GCTGTAGGGG CAGCCTTCGA TTTCCATGCC
GGCCTCCTGC CTCAAGCCCC CCCAACACTC CAGCGGCTTG GTCTAGAATG GGCGTTTCGT
CTATGGCAAG AACCACGTCG GCTGTGGCGA AGGTATCTAT TACTCAATCC ACTCTACGTG
AGTCTATTAT TCGCCCAATT AGCGAAATTA CAGCGCTTTG ACCCTATGGG ATATGCACCT
AAACCACTAA GATATGGATA G
 
Protein sequence
MVDKGKYNLL GVLINAIDYD AAVNRVLTAA HHCQPLTLSA LAVHGVMTGV LDAEQRYRLN 
HLDIVVPDGQ PVRWALNLLY HLGLSERVYG PTLMLRICER ASLEGLPIYL YGSRPQVLQQ
LCNNLRQRFP RLIIAGAQPS QFRRLTAEEQ QAIAAHIRTS GAAITFVGLG CPRQEVWAYE
HRDLLSMPII AVGAAFDFHA GLLPQAPPTL QRLGLEWAFR LWQEPRRLWR RYLLLNPLYV
SLLFAQLAKL QRFDPMGYAP KPLRYG