Gene Cagg_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1968 
Symbol 
ID7268884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2404185 
End bp2405426 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content62% 
IMG OID643566805 
ProductGlutamine--scyllo-inositol transaminase 
Protein accessionYP_002463298 
Protein GI219848865 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0281049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAACCA ACGAACCCCA AACACCTCCA GCCTCGAAGT CATCACCTTC CCAGCCGCGT 
CCCCCTGTGC CGTTGCTGGA TCTCAAAGCC CAATACGTTG CCATCCGCGA CGAGATCCGC
GCTGCGATCG ACCGTGTCGC CGACGCACAG ATGTTCATTC TTGGTCCCGA AGTCGAAGCG
TTGGAACGCG AAGTCGCCGC CTACTCCGGG TGCGCCTATG GCATCGGCGT CTCTTCCGGC
ACCGACGCGC TGCTCGTCGC GCTCATGGCA ATCGACATCC AACCCGGCGA TGAAGTTATC
ACCACGCCCT ACACCTTCTT TGCCACCGCC GGTTCGATTG CCCGGCTTGG CGCTGTTCCC
GTTTTTGTGG ACATCGATCC ATTGACCTTC AATATCGATC CGGCAGGAAT CGAGGCGCGC
ATCACACCCC GCACACGGGT GATCATGCCG GTGCACCTCT ACGGGCAAAT GGCGGACATG
GACCCGATCA TGGAGATCGC GCAGCGTCAC AACCTGATCG TCATCGAAGA CGCAGCGCAA
GCGATCGGAT CGGAGTACAA AGGTCGGCGC GCCGGTTCAA TCGGGCACAT AGGATGCTTC
AGTTTCTTCC CATCGAAAAA CCTGGGAGGC TTCGGCGACG GCGGCATGGT CACCACAAAC
GACGCTGCGC TGGCGGAGCG AGTTCGGTTG CTCCGGGGGC ACGGCGCCCA TCCGAAGTAC
TACCACAAAC TGATCGGCGG CAACTTCCGC CTCGACGCTT TGCAGGCGGC TGTATTGCGG
GTCAAGTTGA AATACCTCGA TGACTGGACG GCGGGGCGGC AGCGAAATGC AGCAATCTAC
CGCCGCCTCT TCAGCGAGGC GGGATTGGTC ACCGACCCAC CAGACTGTCT GACGGACGGA
TGCCGCGCGC GCAGCACCGG CGCGTGCGCT CTGCCGCCAG GAAAAGTCGT GTTGCCGGTC
GAGGCGCCGG AGCGCCGGCA CATCTACAAC CAGTTCGTCA TCCGCGTTCC CCAGCGAGAA
AAGGTCATGG CGACGCTCAA AGCGCGCAAG ATCGGTCACG AAATCTACTA TCCTGTGCCA
CTGCACCTTC AGGAGTGCTT CGCCTACCTG GGGCATCGCC CCGGCGATCT GCCGGTAAGC
GAATGCGCTG CCGCCGAAAC CTTGGCGCTG CCGATCTACC CGGAGTTGAC CGACGAAATG
CTGGAGGCGG TGGTTGCAGG CGTGATGGAG GGATGCGGGT AG
 
Protein sequence
MITNEPQTPP ASKSSPSQPR PPVPLLDLKA QYVAIRDEIR AAIDRVADAQ MFILGPEVEA 
LEREVAAYSG CAYGIGVSSG TDALLVALMA IDIQPGDEVI TTPYTFFATA GSIARLGAVP
VFVDIDPLTF NIDPAGIEAR ITPRTRVIMP VHLYGQMADM DPIMEIAQRH NLIVIEDAAQ
AIGSEYKGRR AGSIGHIGCF SFFPSKNLGG FGDGGMVTTN DAALAERVRL LRGHGAHPKY
YHKLIGGNFR LDALQAAVLR VKLKYLDDWT AGRQRNAAIY RRLFSEAGLV TDPPDCLTDG
CRARSTGACA LPPGKVVLPV EAPERRHIYN QFVIRVPQRE KVMATLKARK IGHEIYYPVP
LHLQECFAYL GHRPGDLPVS ECAAAETLAL PIYPELTDEM LEAVVAGVME GCG