Gene Cagg_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1886 
Symbol 
ID7266377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2313743 
End bp2314555 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content57% 
IMG OID643566723 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_002463217 
Protein GI219848784 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.892292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACAC GACGAATAAT TCCATGTCTT GATGTGAAGG CCGGACGGGT GGTGAAAGGG 
GTGAAATTCC TCAATCATCG TGACGCCGGC GACCCCGTTG CATTGGCTGC TGCATACAAT
GCCGCCGGTG CCGACGAATT AGTGTTTTAT GACATTACGG CCTCTAGCGA TGAGCGAGCA
ATCATGGTCG AGGTCGTAGA ACGAACCGCC GCCGAGGTAT TTATCCCTCT GACCGTAGGT
GGTGGGTTGC GTAGTGTTGA GGATATGTAC CGCATGCTTC GGGCCGGCGC CGATAAAGTC
AGCCTCAATA CGGCGGCAGT CTACAACCCG CACCTGATTG CGGAAGGCGC CCGGCGGTTT
GGTAGTCAGT GTATCGTACT ATCGGTGGAC GCCAAACGGG TTAATGCACC AGGTGAACCA
CCGCGCTGGG AGGTGTTTAC CCATACCGGT GCAAACCCGC GACCGACGGG ACTTGATGCG
ATTGAGTGGA TCAAGCGTGG GATCGATCTA GGTGCGGGCG AAATCTGTAT CAACAGCATG
GATGCAGATG GGGCGCGGAC CGGTTACGAT CTTGAGCTAC TGCAAGCGAT TACGGCTATT
TCGCCGGTGC CGGTGATCGC ATCGGGTGGT GCGGGTTCGC CCGCCGATAT GTACCGTGGC
ATCGTTGAAG GTGGCGCCGA TGCGGTGCTG GCAGCCTCGA TCTTTCACTT TGGTGACTAT
TCCATCGCCG ATGTCAAGCG TTATCTGGCC GAACGCGGTG TACCGGTACG GCAGACGTTC
GGATCTGAGG TGGGCACTTC GACCGGTGCA TAA
 
Protein sequence
MLTRRIIPCL DVKAGRVVKG VKFLNHRDAG DPVALAAAYN AAGADELVFY DITASSDERA 
IMVEVVERTA AEVFIPLTVG GGLRSVEDMY RMLRAGADKV SLNTAAVYNP HLIAEGARRF
GSQCIVLSVD AKRVNAPGEP PRWEVFTHTG ANPRPTGLDA IEWIKRGIDL GAGEICINSM
DADGARTGYD LELLQAITAI SPVPVIASGG AGSPADMYRG IVEGGADAVL AASIFHFGDY
SIADVKRYLA ERGVPVRQTF GSEVGTSTGA