Gene Cagg_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1882 
Symbol 
ID7266373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2308805 
End bp2309563 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content57% 
IMG OID643566719 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002463213 
Protein GI219848780 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0242391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAACAA TTGCCACTCG CCACGGAGCA CTTCACTATC TCATTGCCGG TCAGGGCGCA 
CCGTTTGTTT TAATCCACGG TAATACGTAC ACAGCAACAA CCCAAGTCCG CTTAGCGCAG
CGCTTTGCCG ATCAATTTAC CGTTTATTCA TTCGACTTAC TCGGCCATGG TGGTTCAGCG
CGCCCACCCG ATCTGTTTAC AGCGCGCTAC TTTCAAATGC AGGGTGAAGC CGTAGCAGAT
GCTCTCGCCG GTCTGTTTCA TGAGCCAGTT CCCGTGTTTG GGATGAGCGC TGGGGGGATT
AGCGCTCTGA ATGCCATTTG TATCAGGCCG GATCGCATAG CGGCTTTGAT CCTCGATGGG
GTATTTGCGC GTGTCACCGC TGTAACTTAT CAGGCGCACC GGCAAGCAAC CGCCAGTATG
TCACCAAGTT GGCACCGTTA TATGGCCGGT CAGCATGGCG CCGATTGGTG GCCGATTCTC
AATGCGGGCG TCGAGGCTGT CATCGAGCAG CTCGCCGCGC AAGAAGCCCT CGTGACGCCT
TGCCTCGATC AAATCAAGGT ACCGGTGATC ATTTTTCACG GCGGGAAGGA TCCGTTTGTA
CCCGATGAAC AAGCCCGCGC GGTTGCCGCC GGGATCCGCG GTGCGCGGAT TGTGTATGAG
CCAGAGGCTG GGCACTTGAT CGCATGGCGT AACCCTGACG CCTTTCGAGC ACGGGTGGTG
CGGTTTTTGA CGGAACACGG CCTTGTGCGG GTAGAGTGA
 
Protein sequence
MPTIATRHGA LHYLIAGQGA PFVLIHGNTY TATTQVRLAQ RFADQFTVYS FDLLGHGGSA 
RPPDLFTARY FQMQGEAVAD ALAGLFHEPV PVFGMSAGGI SALNAICIRP DRIAALILDG
VFARVTAVTY QAHRQATASM SPSWHRYMAG QHGADWWPIL NAGVEAVIEQ LAAQEALVTP
CLDQIKVPVI IFHGGKDPFV PDEQARAVAA GIRGARIVYE PEAGHLIAWR NPDAFRARVV
RFLTEHGLVR VE