| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1839 |
|---|
| Symbol | |
|---|
| ID | 7266283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2255760 |
|---|
| End bp | 2256500 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643566675 |
|---|
| Product | peptidase A24A domain protein |
|---|
| Protein accession | YP_002463170 |
|---|
| Protein GI | 219848737 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.639181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC TCTTTGTCGC CGTTGTCGGT CTGGTGCTAG GTAGTCTGCT CAATATCCTG
ATCATTCGCT TGCCGCGCGA ACAACGGTTG TGGGGGTGGC CACGCTGTAT TCGTACCGGC
CAACCGCTGC GCTGGTGGCA ACTCTTACCG GTACTTGGGT GGGTATTACA ACGTGGCCGG
GCCGCCGATG GTCGTCCGCT GCCGGTGATC TACCCGCTGG TTGAAATCGG GAGCGCTCTC
TGGCTCTGGC GGCTTTACGA TCTGTACGGG TTCAGCCCGC TCTTCGCCTA TTTAGCCTTC
GTCGGTGCAG TGCTTATCGT TACGGGCGTC GTCGATTGGC TCTACCGCTG GATCTACACC
TTTGTCATTC TCGGTGGTGC CCTGATTGCT TTCATCTGGG GGTCAATCGC GGGTGCAGGC
TGGCGCGAAC TGCTGCTCGG GAGTTTGATC GGTGGCGTTG GCTTTCTGTT TCTCTACCTG
CTGGCGTTAA TCCTCTTCCC AAGCAAATCG GCTCCGTTTG GATTGGGTGA TGTTTACCTC
GCCATCTTTA TCGGTGCTGC CCTTGGGTTG CGTCATCTGG GGCCGGCTTT GATCTACGGT
GTCTTTATGG CCGGGATCGT CGCAGCCGGT ATCTTACTTG CCCGCCGGCT TGGCCGCGCA
ACCCCAGAAT ACTTGCCATA CGGTGCGTAT TTGTGTTTGG GGGTTCTCCT GTACGTCGCG
TTTGGTGGTT ACCGGTTGTA A
|
|---|
| Protein sequence | MIDLFVAVVG LVLGSLLNIL IIRLPREQRL WGWPRCIRTG QPLRWWQLLP VLGWVLQRGR
AADGRPLPVI YPLVEIGSAL WLWRLYDLYG FSPLFAYLAF VGAVLIVTGV VDWLYRWIYT
FVILGGALIA FIWGSIAGAG WRELLLGSLI GGVGFLFLYL LALILFPSKS APFGLGDVYL
AIFIGAALGL RHLGPALIYG VFMAGIVAAG ILLARRLGRA TPEYLPYGAY LCLGVLLYVA
FGGYRL
|
|---|
| |