Gene Cagg_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1800 
Symbol 
ID7267712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2206682 
End bp2207464 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content59% 
IMG OID643566640 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_002463135 
Protein GI219848702 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.731104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.6989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGT TGACTCTGAT CCGCAACGGG CCGGTAGCCA CATTGATCCT ACAACGCCCA 
GCAGTTCACA ATGCGTTTAA CCCGGAGGTT ATTGCCGGTA TCACCGAGGT ATGTAAAGAG
CTACGGGACG ATCCGGCTGT GCGCGTGTTG GTCCTACAAG GTGACGGGCC ATCGTTTTGT
GCTGGCGCCG ATTTACATTG GATGCAGCAA AGTTTGTTGT ACACTCACGA GGAAAATTTG
GCCGATGCAG CCCGCCTCGA TGCAATGTTC GCGGCGCTCG ATACGTTACC GCAAGCGGTA
GTGGCGCGGG TGCATGGTGC GGCGCTGGGG GGTGGTGTAG GGTTGGTGTG TTGCGCTGAT
TATGCCGTAG CGGCTGACGA TGCAGTGTTT GGGTTGACGG AAGTGCGTTT GGGATTGTTA
CCGGCAGTGA TAGCGCGCTT CGTAGTGGCG CGGATTGGGC TGGGATATGC ACGGGCGTTG
TTCGTAACCG GGCGTCGGCT GAAGGCTGCG CAGGCCTTGG CAATGGGTTT GGTACACGAA
GTAGTATCGG CTGATCAACT CGATGCGGCA GTGGAGGCTG TGGTGAGCGA TCTGCTGCGC
GGTGGCCCAA AGGCGATTGC GGCCAGTAAA GCGTTGTTGC GCGCTGTTCG TACTGAGCCG
CTGGCCGAGG TGCGTCGGTT GTCGATTGAG GCAATTGCGG CTGCACGAAC CGGGGCGGAG
GGTCAGGCTG GCCTACGTGC GTTTCTCAAG CGGGAGTTGC CACCGTGGGT GCTGAATGAG
TAG
 
Protein sequence
MTVLTLIRNG PVATLILQRP AVHNAFNPEV IAGITEVCKE LRDDPAVRVL VLQGDGPSFC 
AGADLHWMQQ SLLYTHEENL ADAARLDAMF AALDTLPQAV VARVHGAALG GGVGLVCCAD
YAVAADDAVF GLTEVRLGLL PAVIARFVVA RIGLGYARAL FVTGRRLKAA QALAMGLVHE
VVSADQLDAA VEAVVSDLLR GGPKAIAASK ALLRAVRTEP LAEVRRLSIE AIAAARTGAE
GQAGLRAFLK RELPPWVLNE