Gene Cagg_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1595 
Symbol 
ID7268161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1946391 
End bp1948790 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content59% 
IMG OID643566436 
ProductN-acetylmuramoyl-L-alanine amidase family 2 
Protein accessionYP_002462932 
Protein GI219848499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00111453 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAAC ACAAAGCGCT GCGGATTGGT CTTCTTCTCG TGTTCGCCGG AATCCTCGCG 
GCAACATTAC CGGTTGCAGC GCGGCCAAGC ACACTAGCCG CACAAGTTTC GAGTTGGCGA
TTGAGCAGTG TGCGTGATTG GGAGGCCGGC TCGATCTCCG ATCTGTTGGT GATGAATAAT
GCCGGCGGCG AGTTACGGTT GGCTGCCGAG GCCAGTATGG GTACCTTTGT CTCGGCACCG
TTTGAGACGG CATTTGCCGC GAATGCAGCC GGTGCGGTGT GGCGCGCCGA GGTGATTCCC
GGAACCGACG TGCGCCTTGA ATTACGGGCA CGTGCAACTC CGCCGGGTGA TAACGACGCG
GGGTGGGGGT CGTGGCTACC ACTGGTCGTG GCCGATAAAC CGCCGGCTGC TGACCCTGAT
GCGTTGACGA CAGCCGTGCC GTTGGCATTG CCCGACGATA CGCGCTATCT GCAATTGCGG
GCAACGTTCA CCAGCCAGAT ACCGCGTGCC TCTGCCATTC TCGATGAGGT GACCGTCTCG
TATATCGCCA CCCAAGTCTC ACCGCCAATC TTCGCTGCCG GTCTGCCGCA GCGCCCAATC
TTGTTTGGTC AGCCGGTGCT GACCGAACGC CCATTACAAA TTGCTCGTGC CGATTGGGCC
GAGCCGGCCG CCGCTCGTCT CGAGCGGCGC GATCCACGTG GGGTTGTGAT TCATCAGATT
CCGGTTGATG TGCCGTCGTC GGCGACGTTA GCTTATCTGC GCGCGTTGCT GGTCTATCAG
ACGAGCATTC TTGATTGGGA TGATCTGATT TATCACTATA TCATCGATAG CGAGGGTAAT
CTGTTTGAAG GTCGTCTTGG TGGGCCGACA TCGCCGGTAC GGTTGGTTGA GGGTAGTGTC
GCCGATGTGC AGATTGCGCT GTTGACCCCG GTCGATCAGC CGCCGACCCT GGCGGCACAA
GCTCGCCTGA CGGCGTTGCT CGCATGGCTA ACGCAGACCT ACAACATACC CCCGACCGGT
CAGCGGCCGT TAGCCGGTGG TGATGGGCTA CGACCAACGA TTGCCGGTCA TTATGAGGTC
AACCCAACAG CACTCGATCC GTACCCGGCG TTCCGCGATC GCTTGCCAAC CCTGCGCACG
CAAGTCGATA CGGCAACGGT GCGCGCACGC TGGTATTTCG CTGAAGGGAA TACCGCCGGT
TACAGCCAAC GGCTGAGCTT CTATAATCCG GCCGGCCGTC CGACAACGGC ACGAATTACG
CTCTTCCCCG AGGTGGGGCA GCCGGTTGTG CGTGAATTGC AAGTTCCCGG TGGTGGACGC
GCCGATCTAA ATGTGAACGA GCTTGTGCCC GGTGCGAATG CACTACCGGC AATAGTAGAG
GCGAATGAAG CGATCCTCGC CGAGCGATCG ATGGCCTTGA CGAGTGACAT CGATAGCGGT
CCCGGTGTCG ATCGGTTGTC GCGGGTGTGG TACTTTGCCG ACGGGAGTAC CACCGAACAG
ACCCAGACCT ATCTGATCAT CTTTAATCCG CAGCCGAATG ATGCGAGTGC GCAAATTACC
TATATGCGAC GCGATGGGAC GGTCTTTACG CAGGATGTGC AGATCGGTGC GCGTAATCGG
CTGGTGGTTG CGGTACACGA CATTACCTTG CCCGACGGTA CACGTCCGTT AGCCAATACC
AACTTCGGGA TGCGGGTGAT TGCTAATCTG CCGGTAGCTG TTGAGCGGAC AATGCGGTTT
GGTCCTGGTG GAAGTGGTTT GCACACCGGT CGCGGGATCG ATCAGCTCGG TCGGCAATGG
TTCTTCGCTG AAGGTACGAC CGAAGGCGAG TTTCGTACTC AGTTGTTGGT GTTGAATCCG
AATAGCCAAC CGGCTAATGT CGAAGCGATC TTTCGTGGTC CGCAGGGTGT GGTGGCAACG
CGCCGTTATG CGATCCCGCC TCGCTCTCAA TTGGCGATTG ACGTGAACGA AGTGGTGCCG
CATCTCGGTT TTGCGACTGA AGTGAAAGCT GACCGACCGG TAGCCGTTGA ACGTGCGATG
CGATTTGCCG GTGGTAATGT GGGAACGATC GGGGCCGGTG CGCGTGAGCC GGCCTATCGC
TGGGCGTTCA TTGACGGTCG GACGAGTGAC GCGACGTATT ATCTGTGTCT GAGTAATGTC
AGTCCGCTCT CGGCAATGGT GACCATTGAG ACAGCGTTCG GCGATGGTAC GAAAACGGAA
CTCGGTGTAC GTATCCCTGC CGGTGCTCGC TATACGCTAG CCTTGCACGA AGCATTTCCC
AACGAATCTG CGGTGACGGT GATTGTGCGG AGCAACCAGC CGATTGTTGC CGAACGGTCG
CTCTTCCCTG GTGGTGGTGT ACGCGGTGGT AGTACGGCCC TTGGTATTCC ATTACCGTAG
 
Protein sequence
MIQHKALRIG LLLVFAGILA ATLPVAARPS TLAAQVSSWR LSSVRDWEAG SISDLLVMNN 
AGGELRLAAE ASMGTFVSAP FETAFAANAA GAVWRAEVIP GTDVRLELRA RATPPGDNDA
GWGSWLPLVV ADKPPAADPD ALTTAVPLAL PDDTRYLQLR ATFTSQIPRA SAILDEVTVS
YIATQVSPPI FAAGLPQRPI LFGQPVLTER PLQIARADWA EPAAARLERR DPRGVVIHQI
PVDVPSSATL AYLRALLVYQ TSILDWDDLI YHYIIDSEGN LFEGRLGGPT SPVRLVEGSV
ADVQIALLTP VDQPPTLAAQ ARLTALLAWL TQTYNIPPTG QRPLAGGDGL RPTIAGHYEV
NPTALDPYPA FRDRLPTLRT QVDTATVRAR WYFAEGNTAG YSQRLSFYNP AGRPTTARIT
LFPEVGQPVV RELQVPGGGR ADLNVNELVP GANALPAIVE ANEAILAERS MALTSDIDSG
PGVDRLSRVW YFADGSTTEQ TQTYLIIFNP QPNDASAQIT YMRRDGTVFT QDVQIGARNR
LVVAVHDITL PDGTRPLANT NFGMRVIANL PVAVERTMRF GPGGSGLHTG RGIDQLGRQW
FFAEGTTEGE FRTQLLVLNP NSQPANVEAI FRGPQGVVAT RRYAIPPRSQ LAIDVNEVVP
HLGFATEVKA DRPVAVERAM RFAGGNVGTI GAGAREPAYR WAFIDGRTSD ATYYLCLSNV
SPLSAMVTIE TAFGDGTKTE LGVRIPAGAR YTLALHEAFP NESAVTVIVR SNQPIVAERS
LFPGGGVRGG STALGIPLP