Gene Cagg_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1576 
Symbol 
ID7268142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1928928 
End bp1929647 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content53% 
IMG OID643566418 
Productsuccinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 
Protein accessionYP_002462914 
Protein GI219848481 
COG category 
COG ID 
TIGRFAM ID[TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.790909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAG TGCTCACCCT CACCCGCACG TCGGTCGGCA AGAAGGTGAT AATGGCCGTA 
ACCGGCTTCA TTCTCGTCGG TTTTGTTGTG TTTCACATGT ACGGCAATCT GAAAATGTAT
CAGGGTCCCG AAGTCTATAA TGCGTATGCC GCCGGCCTGC GATCACTCGG TTATCCCGTC
TTCGGACACG AACACCTCCT GTGGATTGCG CGCGTCATCC TGTTGGCGTC GGTCTTTTTG
CATATCTGGG CCGCAACCAG CCTGACATTA CAGAGTCAAC GCAGCCTACG GGCCAGCAGT
ATTTCGGCTA TCCGGCGCTA CGGACAGCAC AAGCGCCAAT CGAGCTACGC CGACTACACG
ATGCGGTTCG GCGGGGTATT GATCTTCTTC TTCATCGTAT ATCACATTCT CCACCTGACT
TTTGGCGTTG TTGGCTACGA GCAGGGTCAG TTCATCCATC CGCACGGCGA TGTGTATGAG
ACCTACAACA ACGTCGTGTA CGGGTTTCAG AATCCGCTGA TCGTCGGTTT CTATTTGCTG
ACGATGGTTT TTCTTGGGCT ACACCTGTAC CACGGCGTCT GGAGTATGTT CCAAACCCTT
GGTTGGAACA ATCGCACCTA CGATCGGCTG TTACGCGGGT TAGCAATCTT GGTAGCGGCA
GCCGTCTTTA TCGGTAATGT CTCCTTCCCG TTGGCGGTCT TTTTTGGTTT TGTTGCGTAA
 
Protein sequence
MTGVLTLTRT SVGKKVIMAV TGFILVGFVV FHMYGNLKMY QGPEVYNAYA AGLRSLGYPV 
FGHEHLLWIA RVILLASVFL HIWAATSLTL QSQRSLRASS ISAIRRYGQH KRQSSYADYT
MRFGGVLIFF FIVYHILHLT FGVVGYEQGQ FIHPHGDVYE TYNNVVYGFQ NPLIVGFYLL
TMVFLGLHLY HGVWSMFQTL GWNNRTYDRL LRGLAILVAA AVFIGNVSFP LAVFFGFVA