Gene Cagg_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1568 
Symbol 
ID7268133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1916784 
End bp1918172 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content57% 
IMG OID643566410 
Producthistidine kinase 
Protein accessionYP_002462906 
Protein GI219848473 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC CTCCGCGTAA TACCATCGAA TTACTGGTGC GCCTGCGTTG GCCATTTGCC 
GCGATCGTTG GGCTATTGTT TGCCCTTACT CGGCTGGTCG AGGGGTTGTT CTTCGATTCG
GCAATGGAAA CGGCAACCGG ACGCGCGGTT GATCCAATTG TGTGGGGTGT GCTGGCGTTT
GCGGCAATCT GGATCGTCTT GAGTTGGGCG ATCCGGCAAG AGCAAGAGCG GCTCTCGACT
GAGGCACGCA TGCTTGAAGC ATTACGCGAG AGTAACGAAC GGCTCGAACT CCTGTACGAG
ATCAATCAAC GGGTCGCGTC GAGTGCGACG CTCGATGAGG TGCTCGATTA CGCTATCACC
TTACCGGCTC GGTTGGTCGA TGCCGTCGCT GCTACCATTG TGCTGACCGA TGAGCAGGGT
CAGCCGTATA CGGCACGGGT GGTCGGGCTT GATGCAACGA CCCTTGAACG GGCACGGGCG
GCCTTCGGGC TGTGGTCAAC GGTGAAATCA CCGACCGATC CGGTTATGTT GTATCCGCAG
CATCCGTGTG GATGGAGCGC CTGTTTGATT GTACCGCTGA TCGAACGTGG TACGCAACCC
ATCGGTTGGA TTGAGGCGTT CCTCAAAGAG GGTGAATCGG CTCGGCGAGA GATCCGCCAA
CCGTTGCTGG CTACTGTTGC CAGTGAACTG GCCGAGGCAG TGATCAATAG CCGGCGGCGC
GACCGCGTCA TCGCGAGCGT GGCGGCGGTA GAACGGGCAA TCAGTGCCGA ACGCACTCGT
ATTGCCCGTG ATCTGCACGA TGGGGTGGCT CAATCGCTTG CGTTTATGCG GATGCGGATA
GATTTGTGGG AAGATTGGCT CCAACAAGAA CCGGAACGGT TGCGGGAAGA GTTTGTAACC
TTCAAAGCAA ATCTCCGTCG CCAGATCGAA GAATTGCGGC GCGCCATTTT TGCGCTGCGC
CCAATTGAGA TCGGTCAACT GGGATTCGGC GGTGCGCTCC GTCGCTTTAT CACCGAGTTT
GCCGATCAGC AAGATTGGGA TGTAGAGATC GATCTCACCG ATGTACCGCC CGATCTGCCG
CCGGTGCTTG AATTGGCTGC GTTTCGCTTT GTCCAGGAGG CGCTCAATAA TGTCGCAAAA
CACGCGCAGG CGCAACGGGT ATGGGTCAAA CTCGGTGTGC GCGATCAGGG GTTGATCATT
CACGTCCGTG ATGACGGCGT GGGGTTTAAT CCAGGAGTTG AGCCACCATC AGGTCATTTT
GGGTTACGTC AGATGCGGGA ACGGGCAGCA GCACTCGATG GGCAGGTAAC GATCATCTCG
CGACCCGGTG ATGGTACTGA GGTGCGCGTG TGGTTGCCGT TGATCTATTC GACGGTCACG
GTGGTTTAA
 
Protein sequence
MKSPPRNTIE LLVRLRWPFA AIVGLLFALT RLVEGLFFDS AMETATGRAV DPIVWGVLAF 
AAIWIVLSWA IRQEQERLST EARMLEALRE SNERLELLYE INQRVASSAT LDEVLDYAIT
LPARLVDAVA ATIVLTDEQG QPYTARVVGL DATTLERARA AFGLWSTVKS PTDPVMLYPQ
HPCGWSACLI VPLIERGTQP IGWIEAFLKE GESARREIRQ PLLATVASEL AEAVINSRRR
DRVIASVAAV ERAISAERTR IARDLHDGVA QSLAFMRMRI DLWEDWLQQE PERLREEFVT
FKANLRRQIE ELRRAIFALR PIEIGQLGFG GALRRFITEF ADQQDWDVEI DLTDVPPDLP
PVLELAAFRF VQEALNNVAK HAQAQRVWVK LGVRDQGLII HVRDDGVGFN PGVEPPSGHF
GLRQMRERAA ALDGQVTIIS RPGDGTEVRV WLPLIYSTVT VV