Gene Cagg_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1446 
Symbol 
ID7269278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1775403 
End bp1776863 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content60% 
IMG OID643566289 
Productputative 2-nitropropane dioxygenase 
Protein accessionYP_002462789 
Protein GI219848356 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00192568 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.276547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCA CCGATTTACC GATGATTATT CAGGGTGGCA TGGGTGCTGC TGTCTCTGAT 
TGGCGGCTAG CACGCGCCGT AGCAGCCTGT GGTCAACTTG GTGTGGTTTC CGGAACCGGG
ATCGATACCA TTCTTATCCG ACGCTTGCAA GATGGAGACC GAGATGGGGC GATGCGCCGT
GCGATGGCCC ATTTTCCCAT TCCCGGCGTA GCCGAACGGG TTTTGGAAAC CTACTTCCGC
CCTAACGGTC GCGAACCAGG CGAGCCGTAT GCGCTGCTAC CGATGTACAA CCTGAAGGTG
AGCAAGGAAC GACAACAGGT GGCGATGCTA GCAGCGTTTG TTGAGGTGTG GTTGGCCAAA
GAGGGGCACC AGCGCCCGAT CGGTATGAAT CTGCTGACAA AGATTCAGTT GCCGAATTTG
GCTTTGCTCT ACGGGGCTTT ATTGGCCGGC GTTGATGTGA TTATTATGGG AGCGGGTATT
CCGCGCGAGA TCCCGGCTGC ACTTGATGCC TTAGCCGCCA ACCAACCCGC ACGCCTCACC
GCTGAAATTG AAGGTGACGA TGGAGCACCA CCGACCTATA TTACGTTCGA TCCGGCCGAG
CATTGGCCGG GCCCACCACC ACCGCTCCGC CGACCGCTCT TTTTGCCGAT TGTCGCCAGT
GTGACGCTGG CGACGATGTT TGCCCGCAAG ATTGCCGGCG TCGATGGATT GGTGATCGAA
GGTCCGACGG CAGGAGGTCA CAACGCGCCG CCACGCGGTG AACTCCGTCT TAACGAACGG
GGTGAACCGG TGTACGGGCC GCGTGATCTG GTCGATCCGA CCAAGATTGC GGCTCTGGGG
CTGCCTTTCT GGCTGGCAGG GGGGACCGCT TCACCGGAAG GGCTGGCTGC CGCACGGGCT
GCCGGTGCGA TGGGGATCCA AGTCGGTACG CTGTTTGCCT TTTGTACCGA TTCGGGGCTT
GACAATACTC TGCGTCGCTC GGTACTCGAC GCAGCAGCCC GTGATGCGGT CGATGTCTTT
ACCGATCCGC GAGCCTCTCC GACCGGCTAC CCGTTTAAGG TCGTGCGTTG GGACAACGAT
CCGGCCCAAG GCGTGCCCCG TCAACGTATT TGTGATCTCG GTTATCTACG CTCAATGTAC
CGCACGCCAA AAGGCACAAT CGGTTATCGC TGCGCCAGTG AGCCGATCGC AACGTTTGTT
AAGAAGGGGA GCGATCTGGC CGAGACTGAA GGCCGGCGCT GTTTATGCAA TGCACTGATG
GCAAATATTG GCGTTGGTCA GGCCCGCGCC GATATTGGTG TCGAGCCACC GTTGCTGACG
AGCGGTGACG ATCTGTTACG CCTGCGCACG ATTTTTGATC TGCGCCGTGG TTACTCGGCG
GCTGATGTGA TCGCCTATCT CCTTGGTGAG CGCCCGGTGG CGGTGACGAT CCCGCAACAG
CAGGAGTCGG TGGCCGGATA G
 
Protein sequence
MRATDLPMII QGGMGAAVSD WRLARAVAAC GQLGVVSGTG IDTILIRRLQ DGDRDGAMRR 
AMAHFPIPGV AERVLETYFR PNGREPGEPY ALLPMYNLKV SKERQQVAML AAFVEVWLAK
EGHQRPIGMN LLTKIQLPNL ALLYGALLAG VDVIIMGAGI PREIPAALDA LAANQPARLT
AEIEGDDGAP PTYITFDPAE HWPGPPPPLR RPLFLPIVAS VTLATMFARK IAGVDGLVIE
GPTAGGHNAP PRGELRLNER GEPVYGPRDL VDPTKIAALG LPFWLAGGTA SPEGLAAARA
AGAMGIQVGT LFAFCTDSGL DNTLRRSVLD AAARDAVDVF TDPRASPTGY PFKVVRWDND
PAQGVPRQRI CDLGYLRSMY RTPKGTIGYR CASEPIATFV KKGSDLAETE GRRCLCNALM
ANIGVGQARA DIGVEPPLLT SGDDLLRLRT IFDLRRGYSA ADVIAYLLGE RPVAVTIPQQ
QESVAG