Gene Cagg_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1376 
Symbol 
ID7267146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1703148 
End bp1703819 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID643566219 
ProductHhH-GPD family protein 
Protein accessionYP_002462719 
Protein GI219848286 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG AAAAATTCCC TTACCTCTTG AAGGCCGGCG CCGAGTTATC AAAGCATAGA 
ATTGCGGAAA CGGAGCTGCC GTGGCGGAAA TATCGAACAC CCTACCGGAT ATTTCTGGCC
GAAATGTTAC TCGTCCGTAC CCGTACCGAT ATTGTGGCCA ATCACTTTGA AAAGATTGCC
TCAAAGTATC CGACAATTGA GGCACTCGCT CTCGCAGACG AAAGTGAATT GAGAGAAGTG
TTGCGCCCCC TGGGGTTATC CAAGCGGTTT CCTTATCTGA TAAAAGCCGC ACGTTATATT
TGTGATAATC ACAATGGAGA GATACCGGCC GACTTTGAGA GCTTGCTTAA AGTCCCGGGA
ATAGGAAAAT ACACTGCTAC TGCCATCCTG ATATTTGCTT ATGGTCAGAA ATTGGTTCCG
GCCGATGTAA ACGTTCTACG TTTTGTTTCT CGGTTTACCG GTCTTGAAAT GGGACATGTG
ACCAAAGGTT CTCGAGAACT ATGGAACCTC TTACCGCTTT TGTCAGAGGC TAACGTCGGC
TTGTCCGCCG AAAATCTTTT GGATTTCACA AGGTTGATTT GTAGAGCTCG TAAGCCCAAA
TGCAATGCAT GTCCCTTGTC TGCTCACTGC TCGTATTTCA AACATGTGCT TTCGGAGCAA
GATGGTCGAT GA
 
Protein sequence
MSAEKFPYLL KAGAELSKHR IAETELPWRK YRTPYRIFLA EMLLVRTRTD IVANHFEKIA 
SKYPTIEALA LADESELREV LRPLGLSKRF PYLIKAARYI CDNHNGEIPA DFESLLKVPG
IGKYTATAIL IFAYGQKLVP ADVNVLRFVS RFTGLEMGHV TKGSRELWNL LPLLSEANVG
LSAENLLDFT RLICRARKPK CNACPLSAHC SYFKHVLSEQ DGR