| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1354 |
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| Symbol | |
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| ID | 7268646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 1678391 |
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| End bp | 1679704 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643566197 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_002462697 |
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| Protein GI | 219848264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0105276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000574581 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCACC GTTCTTCCTT CAACGAACCC ATTGAGTCGT CAGCTCCTGC GTCGTCAGGG
TTGGAACATC TGCGACAACA ATTGCTGATA GCATATGATG GCGCATGTGC AATTAGTGGT
TGTCAAGTTG ATGCTGTCTT GCGTCCAGTT TTGATCGATC CTAATGGGCC GGCTGAGCCG
TATAATGCGT TGTTGTTGCG GGCCGATCTC CAGCAGCTTT TTCAATCCGG TCTGCTGACC
ATCGATGCCA TGACCCTCAA AGTGCTTGTG GCGCCGGCGT TGCAGAATAG TGAATACAGA
GCACTGGCAG GTAAACGGCT CCGTCAGCCG AAACGGTTGC CCCTTCGACC AAGCCGACAT
ATGTTGGCTG CTCATCATCG CCTTTTTCAA CTTGAGCGAC CGTCTCTTGA CTCTTGTACG
GCGCGACCGC CTTCTCTACA GCGATTATTG GCCGTGCAGA GTTGGGTGAA AACGCTGGCA
TTTAGTCCCG ATCAGCAGAC CTTGGCGACC GGTTCTCTGG ATGGGAAACT ACGGCTTTGG
CGGTGGTCTG ATGGTCAATT GCAGCGCGTG CTGAGCAGTA GGATTGATGA AATCAATGCA
GTGGCTTTTA GTCCTGATGG CCAACGGATT GCGGCTGCAG GTCGTCAGGA TGGGGTACAG
GTCTGGCGAG TAGCCGATGG AGAACCGCTC CTGTATCTCC GTAACGACCA ACGCCATGGA
GCACTTTTTA GTGTAGCTTT TCAGCCCAAT GGTGATCTGA TCGCGGCTAC CGGCTGGGCA
CCGGTTATCT GGCTGTGGAA TGCGACTGAT GGCAGCGTAA GTGGGGGCTT ATCCGGTCAC
GAAGGCTTCA TCAATAGTTT GGCATTCCAC CCAGGTGGCG ACTTGCTCTT ATCGGGTGGC
CAAGACCGGA TTGTCCGACT CTGGCGTATC CCCGATCGAT CGTTGGTTCG TGAGATGCAT
GGTCACGATG ACGAGATTCT CAGTGTTGCA TTTAGCGCTG ATGGCGAATT AGCCGCCAGT
GCAAGTGCTG ATGGGGTGAT TATTGTCTGG CAGGTCGCTC ATTGGCAACC GGTGCAGATG
TTGCCTTCCT ATGCTGGAGC GTGTTCGAGT CTTGCGTTTA GTCCTGATAA TCGGTATTTG
GCGAGCGCTC ATGATGGTCG GACTGTGCTC ATGTGGCAGG TAAGTAATGG AGAACTGCGT
TGGGAACTGC GAGGTCATGG CGAACGTGTG ACGTGTGTGG CATTTGCACC GCGCGGGAAT
GTCCTGGCGA GCGGGAGTTT TGATGCGGTA GTGCGAATTT GGGCGTATAA GTAA
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| Protein sequence | MQHRSSFNEP IESSAPASSG LEHLRQQLLI AYDGACAISG CQVDAVLRPV LIDPNGPAEP
YNALLLRADL QQLFQSGLLT IDAMTLKVLV APALQNSEYR ALAGKRLRQP KRLPLRPSRH
MLAAHHRLFQ LERPSLDSCT ARPPSLQRLL AVQSWVKTLA FSPDQQTLAT GSLDGKLRLW
RWSDGQLQRV LSSRIDEINA VAFSPDGQRI AAAGRQDGVQ VWRVADGEPL LYLRNDQRHG
ALFSVAFQPN GDLIAATGWA PVIWLWNATD GSVSGGLSGH EGFINSLAFH PGGDLLLSGG
QDRIVRLWRI PDRSLVREMH GHDDEILSVA FSADGELAAS ASADGVIIVW QVAHWQPVQM
LPSYAGACSS LAFSPDNRYL ASAHDGRTVL MWQVSNGELR WELRGHGERV TCVAFAPRGN
VLASGSFDAV VRIWAYK
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