Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1197 |
Symbol | |
ID | 7267946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1476395 |
End bp | 1477060 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643566040 |
Product | single-stranded nucleic acid binding R3H domain protein |
Protein accession | YP_002462542 |
Protein GI | 219848109 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000457064 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000925706 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCGCA TCGAAATCAG CGCACGCACC GTCGCCGAAG CCGTTGAATT GGCATTGGCC CAACTGGGCC GTGACCGCGA TGAAGTGGCG ATTGAGGTGC TCGATCCCGG CGAGAATGGT GACGAAGCAC TGGTGCGCGT CACCGTCGTC GAAGATGACG AAGAAAAGCC TTCGATTGAA GAGGTGAGTG CGATTGCGCA GCGTATCCTC GAAGACCTGC TCGAACGCAT GGATATTCAA GCCTACGTCA CGTCGGTAAT TTCGCGCGTG CCCGGCCCAC AGGGTAACTT AGAAGAAACG ATTACGCTGC ACGTCGAAGG AGCCGATGAA GAAGCAATGG GTCTCTTGAT CGGTCGGCGT GGCGAAACGC TCCGTTCGTT ACAGTTCTTA TTGAATTTGC TGGTAAGCCG ACGAATACAG GTATGGCCAC AACTGGTGGT TGATGTCGGC AACTATCGCC AACGCCGCCA AGAATCGCTC GAGAGCCTCG CCCGTCGGAT GGCCGAACGA GTACGCCAGA CCGGACGACC GATTATGCTC GAACCGATGG CAGCCTACGA ACGACGTATC GTTCACCTTG CCCTGCGTGA TGATAAGACG ATCTATACCG AGAGTTCTGG GGAAGGCGAA AATCGTAAGA TCGTGATCTA TCCGGCTAAA CAGTAG
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Protein sequence | MKRIEISART VAEAVELALA QLGRDRDEVA IEVLDPGENG DEALVRVTVV EDDEEKPSIE EVSAIAQRIL EDLLERMDIQ AYVTSVISRV PGPQGNLEET ITLHVEGADE EAMGLLIGRR GETLRSLQFL LNLLVSRRIQ VWPQLVVDVG NYRQRRQESL ESLARRMAER VRQTGRPIML EPMAAYERRI VHLALRDDKT IYTESSGEGE NRKIVIYPAK Q
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