Gene Cagg_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1197 
Symbol 
ID7267946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1476395 
End bp1477060 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content55% 
IMG OID643566040 
Productsingle-stranded nucleic acid binding R3H domain protein 
Protein accessionYP_002462542 
Protein GI219848109 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000457064 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000925706 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCGCA TCGAAATCAG CGCACGCACC GTCGCCGAAG CCGTTGAATT GGCATTGGCC 
CAACTGGGCC GTGACCGCGA TGAAGTGGCG ATTGAGGTGC TCGATCCCGG CGAGAATGGT
GACGAAGCAC TGGTGCGCGT CACCGTCGTC GAAGATGACG AAGAAAAGCC TTCGATTGAA
GAGGTGAGTG CGATTGCGCA GCGTATCCTC GAAGACCTGC TCGAACGCAT GGATATTCAA
GCCTACGTCA CGTCGGTAAT TTCGCGCGTG CCCGGCCCAC AGGGTAACTT AGAAGAAACG
ATTACGCTGC ACGTCGAAGG AGCCGATGAA GAAGCAATGG GTCTCTTGAT CGGTCGGCGT
GGCGAAACGC TCCGTTCGTT ACAGTTCTTA TTGAATTTGC TGGTAAGCCG ACGAATACAG
GTATGGCCAC AACTGGTGGT TGATGTCGGC AACTATCGCC AACGCCGCCA AGAATCGCTC
GAGAGCCTCG CCCGTCGGAT GGCCGAACGA GTACGCCAGA CCGGACGACC GATTATGCTC
GAACCGATGG CAGCCTACGA ACGACGTATC GTTCACCTTG CCCTGCGTGA TGATAAGACG
ATCTATACCG AGAGTTCTGG GGAAGGCGAA AATCGTAAGA TCGTGATCTA TCCGGCTAAA
CAGTAG
 
Protein sequence
MKRIEISART VAEAVELALA QLGRDRDEVA IEVLDPGENG DEALVRVTVV EDDEEKPSIE 
EVSAIAQRIL EDLLERMDIQ AYVTSVISRV PGPQGNLEET ITLHVEGADE EAMGLLIGRR
GETLRSLQFL LNLLVSRRIQ VWPQLVVDVG NYRQRRQESL ESLARRMAER VRQTGRPIML
EPMAAYERRI VHLALRDDKT IYTESSGEGE NRKIVIYPAK Q