Gene Cagg_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1189 
Symbol 
ID7267938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1467928 
End bp1468458 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content56% 
IMG OID643566032 
Productrod shape-determining protein MreD 
Protein accessionYP_002462534 
Protein GI219848101 
COG category 
COG ID 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00631925 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGTGATT CTCAGCCAAG ACGAATAGAA GAACGGATAG CGCGCGAGCT AGGGTTGGCT 
TTGGCGTTGC TTGCGATTGC CTTAGTGCAG ACGACAGTGC TCAGTGGGCC GGTTGGGTTG
AGTATTCCGC TCCTGTTGGT GCTGGCAATT GTGCGTGCGC TCGTCGGTGC GAGGACTGCT
GAGCCGGTTC GTGGGTTAAT ACGCGGGTTG TGGTGGGCGT TCTATGGCGG GTTGGCACTT
GATGTCTTGG GGACGTTGCC ACTCGGAAGC CATGCGGTTG CGCAACTTAT CGCAACCGTT
GTCGTTAGCT TATTTGCGCG CCGCTTCGCA CTCGAACGAC CATTAGTACC GTTGGTAGCG
GTAGCCGTTG GTACGGTGAT CTATGAGGTG ATCCTCTTTG CGATCACATT TCCCGCCATG
CCTGATTGGC AAGCCTACTT CCTCGTAGTG GTTGTTCCGT CGCTGTTACT GGCGCTTATT
CCGACCTTAC CGGCAGTAGC GATTATCCAT CGTTTGGTGC GCACCGAGTA G
 
Protein sequence
MGDSQPRRIE ERIARELGLA LALLAIALVQ TTVLSGPVGL SIPLLLVLAI VRALVGARTA 
EPVRGLIRGL WWAFYGGLAL DVLGTLPLGS HAVAQLIATV VVSLFARRFA LERPLVPLVA
VAVGTVIYEV ILFAITFPAM PDWQAYFLVV VVPSLLLALI PTLPAVAIIH RLVRTE