Gene Cagg_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1009 
Symbol 
ID7268381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1247027 
End bp1248850 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content55% 
IMG OID643565855 
ProductGTP-binding protein LepA 
Protein accessionYP_002462360 
Protein GI219847927 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATC AACTACACAT CCGCAATTTC AGCATTATTG CCCACGTCGA TCACGGAAAA 
ACGACATTAA GTGATCGGCT GCTCGAAGCC ACGCGCACGA TTACCGAACG CGAGCAGCGT
GAGCAACTCC TCGATTCGCT TGATCTGGAG CGCGAAAAAG GCATTACCAT CAAACTCAAA
CCGGTACGGA TGGAGTACCG TGCAGCCGAT GGTCAGCTCT ACCAACTCAA CCTAATCGAT
ACGCCCGGCC ATGTCGATTT TAGCTATGAG GTCAACCGAT CGCTGGCCGC CTGTGAAGGT
GCGCTTTTGG TTGTCGATGC TTCGCAAGGT ATCGAGGCGC AAACGCTGGC GAATACCTAT
TTGGCTCTTG AAAACGATCT GGTGATCATT CCCGTTATCA ACAAGATCGA TCTGCCCGGC
GCACACCCTG AAGAGGTCGC GCAGGAGATC GAGTCGGTGA TCGGTATTCC TGCTGAAGAG
GCCATCTTTG CCTCGGCCAA AGAGGGCATT GGTGTGCCGG AGATTCTCGA AGCGATTGTC
AAGCGTATCC CGCCACCACG CGGCCAGCGC CAGCAACCGG CACGTGCATT GATCTTCGAC
TCGCATTATG ACCCGTACAA AGGGGTGATC GCCTATGTGC GGGTAGTTGA TGGTGTCTTT
ACTGCCCGCG ATCGGGTCCG GTTTATGGGC ACCGGCGCCC AAGCCGAAAC CCTCGAACTC
GGCATCTTTC GCCCGGCGAT GACTCCCCTG AACGAGCTGG TTGCCGGTGA GGTAGGTTAT
ATCGCAACCG GTCTTAAGAG TGTCGCCGAT TGTCAGGTTG GTGATACCAT TACCCTGGTC
GATGCCCCGG CCGGTGAACC GCTACCCGGC TATCGCCCGG CCAAACCGAT GGTCTTCGCC
GGTCTCTACC CGATCGACTC GAACGCCTAC CCCGAACTGC GCGAGGCACT CGAACGGCTC
AAGCTAAACG ACGCTGCGCT CTCATTCCAG CCCGAAAGCT CGGCTGCACT TGGGTTCGGT
TTTCGCTGTG GCTTCCTCGG CCTACTCCAT ATGGAGATTG TGCGCGAGCG GCTTGAACGC
GAATACAAAC TTGAACTGTT GATCACAGCA CCGTCGGTAG AGTATCAGGT ATTGCTTTCA
GATGGTGAGA TCGTGACGGT CGCTAACCCA TCCGAGATGC CAGATCTGTC ACGGATCGAA
GCCATCGAAG AGCCGGTGGT CGAGATTAGT GTTATTACGC CGGTACGCTA TATCGGTACC
ATTATGGATT TGGTGACGAA CCGGCGTGGT GTCTTTATCA GTATGGATTA TCTCGACCCG
ACGCGCGTGC TGCTGAAGTA CCGAATGCCG TTGGCCGAAA TTGTGATCGA TTTTTACGAT
CAGCTCAAGA GTCGCACGCA GGGCTATGCC TCGCTCGACT ATCATCTGGC GGGTTATCAA
GAGGCCGATC TGGTCAAGCT CGATATTTTG GTCAACGGTC AGCCGGTTGA TGCGTTGTCG
CTGATCGTCC ATCGTGATTT TGCTTACCAG CGTGGGCGGG ACTTGGTTGA ACGACTACGC
CAACTGATCC CACGCCAAAT GTTTGAAGTA CCGATTCAGG CAGCCATCGG CTCGAAGATC
ATTGCTCGCG AAACGATTCG AGCGTTGCGG AAAGATGTGT TGGCGAAGTG CTACGGCGGC
GACGTAACCC GTAAGCGTAA ACTGCTCGAA AAACAGAAAG AGGGTAAGAA GCGCATGAAG
ATGGTCGGCA GCGTCGAGAT TCCGCAAGAA GCATTTATGG CCATTCTATC GCTCAACGAG
TCGGGGAATG AGCGGGAACG ATAG
 
Protein sequence
MSDQLHIRNF SIIAHVDHGK TTLSDRLLEA TRTITEREQR EQLLDSLDLE REKGITIKLK 
PVRMEYRAAD GQLYQLNLID TPGHVDFSYE VNRSLAACEG ALLVVDASQG IEAQTLANTY
LALENDLVII PVINKIDLPG AHPEEVAQEI ESVIGIPAEE AIFASAKEGI GVPEILEAIV
KRIPPPRGQR QQPARALIFD SHYDPYKGVI AYVRVVDGVF TARDRVRFMG TGAQAETLEL
GIFRPAMTPL NELVAGEVGY IATGLKSVAD CQVGDTITLV DAPAGEPLPG YRPAKPMVFA
GLYPIDSNAY PELREALERL KLNDAALSFQ PESSAALGFG FRCGFLGLLH MEIVRERLER
EYKLELLITA PSVEYQVLLS DGEIVTVANP SEMPDLSRIE AIEEPVVEIS VITPVRYIGT
IMDLVTNRRG VFISMDYLDP TRVLLKYRMP LAEIVIDFYD QLKSRTQGYA SLDYHLAGYQ
EADLVKLDIL VNGQPVDALS LIVHRDFAYQ RGRDLVERLR QLIPRQMFEV PIQAAIGSKI
IARETIRALR KDVLAKCYGG DVTRKRKLLE KQKEGKKRMK MVGSVEIPQE AFMAILSLNE
SGNERER