Gene Cagg_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1002 
Symbol 
ID7268374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1237513 
End bp1240242 
Gene Length2730 bp 
Protein Length909 aa 
Translation table11 
GC content64% 
IMG OID643565850 
Producthypothetical protein 
Protein accessionYP_002462355 
Protein GI219847922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATC AGTTTGTTCG CTGGATGCGC GTGAGTTGGC CCTTCCTCTG GTTTTTGGTC 
TTGACCATAC TCTGGACGTG GCCGCTAGCG ATGCAGATGA CTACCGTCTT GCCCGGCAGC
GGCAGCGATC CGCTCTTTCA AGTCTGGACG TTGGCGTGGG ATGGACATGC GTTGTTGACC
AATCCGGCCC GGATTTGGGA TGCGCCGATC TTTTTTCCGT ATCCTACAAC ACTGGCCTAT
AGCGATCATC ATATTGTGCT GGCGCTGTTG ATGTTGCCAG TCTTGGCGTT CGGCCAGCCG
GTGGCGGCGT ACAACGCGCT GCTGTTGCTG AGTTTTGCCC TCAGCGGCTG GGCGGTCTGT
CTGCTCACCC ATGATATCCT CGCTGAGCAC ACCGAAGAAC CGGCGGCGAC CATCGGCGCG
TTGCTGGCCG GTAGCTTGTT CGCCTTCAGC ACCTACCGGA TGGCCCACCT CAGCCATTTG
CAGATGCTCC AAACGGCGTG GTTGCCATTG GCGTTGTACT GGCTGCGCCA GATGGCGGTG
CGGTCGGGCG GGGCGTTTTG GCGAGCGGCG GCGTTGACCG GCGTGTTTGC CGGTGTGCAA
GCGGTGACAG CGGTCTACTA CGCGCCGATG GCGGCGCTGG CGGTGGGGGT GGCGGCTTTC
GTGTGGTTGT GGCCGGCGCG CTGGCGGTCG CCATTGGCAC GACGGGCGGT GGGGCGCAGC
ATTGGTGGAT TGGCGCTCGC CGGCGCAGTG GCAGTGCTGA TCGCGCTGCC GTTTCTGCTG
CCCTATATGA TGGTCTATGC CTATCTCGGC ATTGTGCGTT CGCCGGGGGA GCTGGTGCGG
TGGTCGGCGC CGCTGACGGC GTATCTGTCG GTGCCGGCGG GGAATGTGCT GTATGGTGCC
GGGTTGACGC CGGTGCAGCC GGGCAGCGAG CAGGAGCTGC TGCTGTTTCC GGGGGCGCTG
GCGGTGGTGT TGGCCGGGAT CGGCGGCTGG CGGTGGTGGC GCGCGGCGCG GCGTGACGGG
TTGGCGCTGC TGTTGATCGG GGCGGCGGGC GTGGTGTTGT CGCTGGGGGT GGCGTTGCGG
GTGCGCAGCG ATGAGGCGGG CGTGGTGGCG GCGTTACCGT ATGGCTGGTT GTACGAGCGA
GTGCCGGGGT TTAACGCGCT GCGGGTGCCG GCACGGTGGT GGATGCTTGG CAGCTTGGCG
GTCGCGGTGC TGGCGGGGAT GGGGGCGGCG TGGCTGTGGC GGGGATGGGG GCGCTGGCTC
GTGCCGGTGG TGGGGGTGTT GGCGCTGCTT GAACATCTGG TATGGCCCAT CCCGCGGCTC
GAGCTGCCCG CGCCGCCGCC GGTCTATCAA TGGCTAGCGC AATCGTCGCC GTCTGCTCAT
CGCGTTGTGC TGGAATTGCC GCTTGATACG AAACTGAGCG GGATCTTCTC GGAGCGCGTT
GCTTGGCGCC AATTTTACCA AATTCAACAC TGGCGCACGC TAGTAATCGG GTACAGCGGG
TTGATTCCGG CAGGAACGTA TAATCTCTTA CTGCGCTTGC AGCAGTTACC GGACGATGCC
ACTATTCGCT ATCTGGCGCG ACTCGGGATT GACACGCTTA TTATTCATCG CAATGAATTT
AATGATCAAG CGCAGCTTGC TAATCTAATG GCATGGGCAG ATCGCACGAA CGTTCTTCAA
CGACTGGCCG AAACAGGTGA TGCGGTAGTC TATGCTCTGC AGCCGGATCG CACTCTTGCG
ACGCTCGTTA CGCCGGCCAG CACTATCTTC CTTTCCGGGG ATGTGCTTAT CCCCGATCTG
GTAGCGCTCG CCTTGCAGCG ACGCTGGCAA GCGGCAGGGG CGGTTGTCTA CGGACCGGGG
AGAGAGCAAT ATTATCCAGC CTTGGCTACC CCCCAATCCG GTCAGCGCTT CGATTACGTG
GCGCTGGCGC CACGCGCAGA TCCGCGTCCG TTTGGCACAA TGCCGGCGCT AGTGCGGTGG
CAAGAGGAGG GGGTGGCGGT CTATGCCGTT CCTGCTGAGC TGTTGGCAAC GCAGGAGTTA
GGCGCGCCGG ATATCGGCCA ATTTCACCCG CGCCATCCGG CGACGTTGAC GGTGCGGTTG
CGTGGTGATA GCGTGGAAGT TGGCCGGAGC CGGATCGCCT TGCCTACCGT GGTGGAAGCC
GCGACCCTGC TGCTTGATGT GGCGAGTCTG ACCGAGCAAG AGGTGCAGGT GGGCGAGACG
AAGCAGCGGT TGGCTGCCGG CGGGCAGACG TTGACTGTGC CGATCAGCCG TGATCAACCG
GTAACGATCA GTGGCGACGC GGCGACGTTC AGCATCGTGC GTGTGCAGCT CTGGCGGGGA
ATGCCGGCGC TGGATGCAGT GGGTGGCGTG GCGTTGACGG TTGAGAGCGC GTTTGCTGGC
TCGCGGCTGC GGATTGCTGC GCAGTATAGC GGGAATACCC CCCTGCTGCT TGAAATTCAT
GGCGCGGAAG CGGGAACTGA ACGGCCCGTG ATGTTGGCGC GCGGAACGCT GCCAGTATCA
GCGGCAGGAG CGGTGGACGT GACAATTGAC GCGCGCCAGC CGCAGGCGGC GTGGTTGAGC
CAATCACCGG CAGCGGTGGA TGGCCGGTAC ATCGCGTACG TGAAGCTCAG TCCTGACACC
GATGGCATTC CGATTGCTCA ATTTCAGGTG CGCAACGGCG AGGTGGTAGC TGCGCAACCG
GTGCCGCTGC CGTTGACGAT CTTGCGGTGA
 
Protein sequence
MQDQFVRWMR VSWPFLWFLV LTILWTWPLA MQMTTVLPGS GSDPLFQVWT LAWDGHALLT 
NPARIWDAPI FFPYPTTLAY SDHHIVLALL MLPVLAFGQP VAAYNALLLL SFALSGWAVC
LLTHDILAEH TEEPAATIGA LLAGSLFAFS TYRMAHLSHL QMLQTAWLPL ALYWLRQMAV
RSGGAFWRAA ALTGVFAGVQ AVTAVYYAPM AALAVGVAAF VWLWPARWRS PLARRAVGRS
IGGLALAGAV AVLIALPFLL PYMMVYAYLG IVRSPGELVR WSAPLTAYLS VPAGNVLYGA
GLTPVQPGSE QELLLFPGAL AVVLAGIGGW RWWRAARRDG LALLLIGAAG VVLSLGVALR
VRSDEAGVVA ALPYGWLYER VPGFNALRVP ARWWMLGSLA VAVLAGMGAA WLWRGWGRWL
VPVVGVLALL EHLVWPIPRL ELPAPPPVYQ WLAQSSPSAH RVVLELPLDT KLSGIFSERV
AWRQFYQIQH WRTLVIGYSG LIPAGTYNLL LRLQQLPDDA TIRYLARLGI DTLIIHRNEF
NDQAQLANLM AWADRTNVLQ RLAETGDAVV YALQPDRTLA TLVTPASTIF LSGDVLIPDL
VALALQRRWQ AAGAVVYGPG REQYYPALAT PQSGQRFDYV ALAPRADPRP FGTMPALVRW
QEEGVAVYAV PAELLATQEL GAPDIGQFHP RHPATLTVRL RGDSVEVGRS RIALPTVVEA
ATLLLDVASL TEQEVQVGET KQRLAAGGQT LTVPISRDQP VTISGDAATF SIVRVQLWRG
MPALDAVGGV ALTVESAFAG SRLRIAAQYS GNTPLLLEIH GAEAGTERPV MLARGTLPVS
AAGAVDVTID ARQPQAAWLS QSPAAVDGRY IAYVKLSPDT DGIPIAQFQV RNGEVVAAQP
VPLPLTILR