Gene Cagg_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0918 
Symbol 
ID7267991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1144519 
End bp1146453 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content55% 
IMG OID643565766 
Producthypothetical protein 
Protein accessionYP_002462272 
Protein GI219847839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.116546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAA CGGCTGCTGA AAAGGTCTAT CGCTATTCTT GGCACCGACG CTGGTGGCTC 
GCGGCAGTCG GCTGGCTGTT CGTTGTGATA AGTTTGTACG GAGCCGGTTT CCAACTGCTC
CGTGGTCTCA TGTTCACACC TTTCGCTGCA TGGCTGCGTA GTACCCCATG GCTCCGTCCA
CTTTACCAGT GGCTCTCGCC CGCGCCGCGC GATTTGAACG CTTGGCTCGC AGAGGCATTA
GTGGTTCTGT TGTGGGCAGC GGTTGGGCTG TGCGTCGCGT TGATCCTCTT CAATGCGTTG
CCCACCATTC GGGTGAGCAG TCGTGGCCTA CTGATTGAAT TTGCCGGTGG TTGGCTACCG
GTTGCGTGGC AAGATTTAGA TGAGATTCAC GTGACCGGCG ACGAGGCTGG GCTGCGCTTC
GTACTTCTGG TGATTCCGGC CAAGACGGCG AAACGGCTTA CCGGTTGGCA CCAGTTGTAT
GGGTTGCTAT ACGGAACCAC CATCCGACCG TCCTTCCTCA TTACGTCAAC GATTGATGAC
TTCGACCGGT TGCTCAATAC CATCTTGCAA GAGAATAGTC GCGCAATCCG TGCGTTTGAA
GGGCGTCAAC CGGTTGTCGT GAATGAGCAA CGTCGTTCAC CATTGTTTAG CGTCTTCCTG
CGGGGTAAAC CTGCCGAGAC GTTGCCGGAC GTTGATCTTC CACCCACTAC CATTCCAGAT
GTTACCACCT CCTTGCCCGC CTGGTCACTC GTAAGGTTGA CAACCATTGG TACGGCTTGC
GTAACATTGA TCGCCGGTCT TGTTCATTAT CGGAGCTACT GGGATCGTGC GCTGACCCTG
CTCTTTCCCG ACTTGCGTCG TCAATCCGCT TTCTTGTGGG TAAGCCAAAT CCCTATCTAC
AACAAGATAT TTAGTGCCTA CCAGGGGGTT AGCGTCCCCT TGCTCGGTAT TGATGGCCGA
CCTGACTTGC CGGCGCCGAT CTGGCTCCTG ATCGCAGCGC ATCTTATGTT GGCATCGGTC
ATAATAGCCA TCATTGCGTT GGTTGTTGCG CTACCGGTTG CCGCAACCGC CGGTCAACAG
GCTCTGACCA TCCGCTTTGT ACCACGACCG TTGCCATTTA CGCGGTCAAT CCCGTGGAGC
CACATCAGTG CGTTCTCCGT GATTGATCTG GGGTTTGGCC ATACTCTGGC GTTTGTTCAA
TCGCCGCGAT TACCCTGGCT TTGTCATCTT TGCGGTTTGC TGGTGACCGG ACGGTGGACG
GCGGGAACCG TGTTCGTCGG TACGATGCGA CAATGGCCAC AGTTCATCGA GCAATGCGCC
GAACGGCTGA GCCACTTACC GCCAATCGAT GAGAAACCAC GTTTTCGACC GTCTGCATTC
GTACCAATTG TGCAATTGAT CGGCCAACCG GTAACGACTA TTCGTACTCT CCGCGCCGAT
CTAGCGATAG CGAGCAATTC CTCGGCGGAA CATTTGTGGG TAGCAGGGAA GACGATGGCG
TTGGTAGCGC TACCCCTCGG CTTGTTATTT ACCGTTCCCA CCCTGCTTCA CGGCGATTGG
TGGCCGAGTA GCAACGCCTT GTTTGGTGGC ATTGGATTCT GGATGGCCGG CTTGCTAGAA
TGGCCGCTCG TTGGGCTTAT TGCGATGATT ATGTACGGCA CATCTGGTAC TGAGCAAGAG
CAGGTATTCG CTCTGTACCC ACGAATCCAG ATGCCACGGC TCTTGCCAAT GTTGCTCGCG
CTGGTCAGTT TGCTGATCAA CGTACCATGG CTTGCCGCCC TGTTCTGGTT ACTCGCCCTT
GTGATTGCGT ATTGGGTCAC AGCCGCACTC TGGGTTGAGG TATATGAACG GGAAGGCGTG
CAGGCTATCA CCGGTGGTTT GTTGCCTGTT GTATGGCAAT TGATAATTAT GCCAGGATTC
TGGCTATTGC GCTAA
 
Protein sequence
MSLTAAEKVY RYSWHRRWWL AAVGWLFVVI SLYGAGFQLL RGLMFTPFAA WLRSTPWLRP 
LYQWLSPAPR DLNAWLAEAL VVLLWAAVGL CVALILFNAL PTIRVSSRGL LIEFAGGWLP
VAWQDLDEIH VTGDEAGLRF VLLVIPAKTA KRLTGWHQLY GLLYGTTIRP SFLITSTIDD
FDRLLNTILQ ENSRAIRAFE GRQPVVVNEQ RRSPLFSVFL RGKPAETLPD VDLPPTTIPD
VTTSLPAWSL VRLTTIGTAC VTLIAGLVHY RSYWDRALTL LFPDLRRQSA FLWVSQIPIY
NKIFSAYQGV SVPLLGIDGR PDLPAPIWLL IAAHLMLASV IIAIIALVVA LPVAATAGQQ
ALTIRFVPRP LPFTRSIPWS HISAFSVIDL GFGHTLAFVQ SPRLPWLCHL CGLLVTGRWT
AGTVFVGTMR QWPQFIEQCA ERLSHLPPID EKPRFRPSAF VPIVQLIGQP VTTIRTLRAD
LAIASNSSAE HLWVAGKTMA LVALPLGLLF TVPTLLHGDW WPSSNALFGG IGFWMAGLLE
WPLVGLIAMI MYGTSGTEQE QVFALYPRIQ MPRLLPMLLA LVSLLINVPW LAALFWLLAL
VIAYWVTAAL WVEVYEREGV QAITGGLLPV VWQLIIMPGF WLLR