Gene Cagg_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0899 
Symbol 
ID7267972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1128148 
End bp1129233 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content57% 
IMG OID643565748 
ProductPolyprenyl synthetase 
Protein accessionYP_002462254 
Protein GI219847821 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0021773 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000547465 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGGCT ACCAACCGCA TCTTAATCCG TCGGGATCGG TTTCGCTGCC TGAGGCGCGC 
ATACCAACAA CTCATAGCAG CTACCATACC GGCGAATTAC CACCACAAAC GGCCGGTGGC
TTAGCCGGTA TCTTCCACCG GGCCGGTATT TTGGCCGATC TCGGCGCTAT CGAGCAGCGG
CTCCTTGAAT TAACCCATTC ACGAGTTGCC GTCATTAGTG CTGCCGGCGC CCACACAGTA
CGTTCCGGCG GCAAGCGACT TCGCGCGGCG CTCGCCGTTT TAGCCGCGCG GCTCGGCCAT
TACCAGCTCA ACCGCGTGAT ACATCCGGCG GCCGCCGCCG AACTCATCCA CGCCGCCTCG
CTCGTTCACG ACGATTTAGT CGATCAAGCG AATCGCCGTC GTGGTCAAAT CACCGTCCAC
GCCCGCTGGG ATAACGATGT TGCGCTGATG GTCGGTGACT ATTTCTTTGC GCTCGCTGCT
GCCGAGATGG CGCGAAGCCC TGATCCGCGT ATTATTACAT TCTACGCCGA AGCGGTGCAA
ACCATTTGCG AGGGTGAATT AAGCCCCGTT ACCGTCGCCG AGCCGCTCGA CCGTGCTCTG
CGCCAGTATC TGTACAAGAC CGGAGCGAAG ACGGCGGTGT TGTTTGAAGC GGCATGTAAA
GCTGGGATGG TTTCCGGCGG TGGTAGTGAT GATCAAATCT TGGCCCTGGG TCGGTATGGC
TACGATCTCG GTATGGCGTT TCAGATTATC GATGATGTAC TCGATTTTAT CGGCGATGAA
CGCATGCTGG GAAAGCCGGC GGGCAATGAT CTGCGGCAAG GAACAATTAC CTTACCGCTT
ATCTACGCGA CGGCGGCATC ACCAAACCCC CTTCTCCGCG AGGTTTTGAT GCACAATCCG
CCACCTGACC CTCTTGTGAG TGAGGTTATT CGTGAAGTCA TTGCGGTTGG TGGGGTGGCC
GCCGCCCAAA CCGAAGCAGA ACGCTATATC GAGCAGGCAA TCGCTCATCT CGACATCTTC
CCACCTGGTC CGGCTCGCCA GGCGTTAATC GACATTGCAC ACTTTGTGAT TGAACGTAAG
ATGTAA
 
Protein sequence
MAGYQPHLNP SGSVSLPEAR IPTTHSSYHT GELPPQTAGG LAGIFHRAGI LADLGAIEQR 
LLELTHSRVA VISAAGAHTV RSGGKRLRAA LAVLAARLGH YQLNRVIHPA AAAELIHAAS
LVHDDLVDQA NRRRGQITVH ARWDNDVALM VGDYFFALAA AEMARSPDPR IITFYAEAVQ
TICEGELSPV TVAEPLDRAL RQYLYKTGAK TAVLFEAACK AGMVSGGGSD DQILALGRYG
YDLGMAFQII DDVLDFIGDE RMLGKPAGND LRQGTITLPL IYATAASPNP LLREVLMHNP
PPDPLVSEVI REVIAVGGVA AAQTEAERYI EQAIAHLDIF PPGPARQALI DIAHFVIERK
M