Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0899 |
Symbol | |
ID | 7267972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1128148 |
End bp | 1129233 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643565748 |
Product | Polyprenyl synthetase |
Protein accession | YP_002462254 |
Protein GI | 219847821 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0021773 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000547465 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGGCT ACCAACCGCA TCTTAATCCG TCGGGATCGG TTTCGCTGCC TGAGGCGCGC ATACCAACAA CTCATAGCAG CTACCATACC GGCGAATTAC CACCACAAAC GGCCGGTGGC TTAGCCGGTA TCTTCCACCG GGCCGGTATT TTGGCCGATC TCGGCGCTAT CGAGCAGCGG CTCCTTGAAT TAACCCATTC ACGAGTTGCC GTCATTAGTG CTGCCGGCGC CCACACAGTA CGTTCCGGCG GCAAGCGACT TCGCGCGGCG CTCGCCGTTT TAGCCGCGCG GCTCGGCCAT TACCAGCTCA ACCGCGTGAT ACATCCGGCG GCCGCCGCCG AACTCATCCA CGCCGCCTCG CTCGTTCACG ACGATTTAGT CGATCAAGCG AATCGCCGTC GTGGTCAAAT CACCGTCCAC GCCCGCTGGG ATAACGATGT TGCGCTGATG GTCGGTGACT ATTTCTTTGC GCTCGCTGCT GCCGAGATGG CGCGAAGCCC TGATCCGCGT ATTATTACAT TCTACGCCGA AGCGGTGCAA ACCATTTGCG AGGGTGAATT AAGCCCCGTT ACCGTCGCCG AGCCGCTCGA CCGTGCTCTG CGCCAGTATC TGTACAAGAC CGGAGCGAAG ACGGCGGTGT TGTTTGAAGC GGCATGTAAA GCTGGGATGG TTTCCGGCGG TGGTAGTGAT GATCAAATCT TGGCCCTGGG TCGGTATGGC TACGATCTCG GTATGGCGTT TCAGATTATC GATGATGTAC TCGATTTTAT CGGCGATGAA CGCATGCTGG GAAAGCCGGC GGGCAATGAT CTGCGGCAAG GAACAATTAC CTTACCGCTT ATCTACGCGA CGGCGGCATC ACCAAACCCC CTTCTCCGCG AGGTTTTGAT GCACAATCCG CCACCTGACC CTCTTGTGAG TGAGGTTATT CGTGAAGTCA TTGCGGTTGG TGGGGTGGCC GCCGCCCAAA CCGAAGCAGA ACGCTATATC GAGCAGGCAA TCGCTCATCT CGACATCTTC CCACCTGGTC CGGCTCGCCA GGCGTTAATC GACATTGCAC ACTTTGTGAT TGAACGTAAG ATGTAA
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Protein sequence | MAGYQPHLNP SGSVSLPEAR IPTTHSSYHT GELPPQTAGG LAGIFHRAGI LADLGAIEQR LLELTHSRVA VISAAGAHTV RSGGKRLRAA LAVLAARLGH YQLNRVIHPA AAAELIHAAS LVHDDLVDQA NRRRGQITVH ARWDNDVALM VGDYFFALAA AEMARSPDPR IITFYAEAVQ TICEGELSPV TVAEPLDRAL RQYLYKTGAK TAVLFEAACK AGMVSGGGSD DQILALGRYG YDLGMAFQII DDVLDFIGDE RMLGKPAGND LRQGTITLPL IYATAASPNP LLREVLMHNP PPDPLVSEVI REVIAVGGVA AAQTEAERYI EQAIAHLDIF PPGPARQALI DIAHFVIERK M
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