Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0895 |
Symbol | |
ID | 7267967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1124334 |
End bp | 1125116 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643565743 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_002462250 |
Protein GI | 219847817 |
COG category | [K] Transcription |
COG ID | [COG1378] Predicted transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.483175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000338741 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTAGAAA CGAACTTACT CGAACAATTA ACGGCGCTGG GGCTAACCGA GTACGAAGCA CGGGTCTATT TGGCATTGTT GACCGACTAT CCGGCTACCG GCTATCAGAT CAGCAAGCTG GCCGGCGTGC CGCGGTCGAT GGTCTACGAG GCGTTGGGGC GATTAGAGGC GCGGGGCGCC GTTCTCAAGT CAGTTGAAGA GAAGGCGACG TTGTATCGTC CGATCTCACC GGCCATTTTG CTCGACCGGT ACGAGCGTGA AGCACATGAG CGGGCCGAGG TGTTGCGAAA CCAGCTCATG CCGCTCTTTC GGCACGAAGA GAATGACCGC TTGTGGAACT TTAGCGGGCG GCGCGAAGCG TTAGCAGCGG CGCGCGATCT GATTGAAGGC GCTGAACGTG AGTTGATGCT GGTGCTGACC GACGCCGATG TTGAAGCACT CTATCCGGCG TTGGCTGCCG CCCATGCGCG TGGGGTTGCG CTGGGGGTGA TTCTCACCGG TGAAGCGCCC TTTTCGTTTG GCCAAGTGGT GCGCCACCCC AAACGCGAGA CCGAGCTGCA CGGCATGGTT GAGACGCTGA TCGTCGTGGC CGATGAGCGA GAGTTTCTGA TCGCTTCCGG CCATCTGGCG ACAACGGCCA CCGTCACTAC CAACCGCAAC ATGGTCTTGA TCGCGCGCCA GTTTATCTGG ATGGAGTTGT TTGCACAGCG CATCTTTGCC CGATTAGGCG AAGACCTACT CGCCCGTCTC GATCCAGAAG ATCGACAAGT TTTGCATTCG TAG
|
Protein sequence | MVETNLLEQL TALGLTEYEA RVYLALLTDY PATGYQISKL AGVPRSMVYE ALGRLEARGA VLKSVEEKAT LYRPISPAIL LDRYEREAHE RAEVLRNQLM PLFRHEENDR LWNFSGRREA LAAARDLIEG AERELMLVLT DADVEALYPA LAAAHARGVA LGVILTGEAP FSFGQVVRHP KRETELHGMV ETLIVVADER EFLIASGHLA TTATVTTNRN MVLIARQFIW MELFAQRIFA RLGEDLLARL DPEDRQVLHS
|
| |