Gene Cagg_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0895 
Symbol 
ID7267967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1124334 
End bp1125116 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content59% 
IMG OID643565743 
Producttranscriptional regulator, TrmB 
Protein accessionYP_002462250 
Protein GI219847817 
COG category[K] Transcription 
COG ID[COG1378] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.483175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000338741 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAGAAA CGAACTTACT CGAACAATTA ACGGCGCTGG GGCTAACCGA GTACGAAGCA 
CGGGTCTATT TGGCATTGTT GACCGACTAT CCGGCTACCG GCTATCAGAT CAGCAAGCTG
GCCGGCGTGC CGCGGTCGAT GGTCTACGAG GCGTTGGGGC GATTAGAGGC GCGGGGCGCC
GTTCTCAAGT CAGTTGAAGA GAAGGCGACG TTGTATCGTC CGATCTCACC GGCCATTTTG
CTCGACCGGT ACGAGCGTGA AGCACATGAG CGGGCCGAGG TGTTGCGAAA CCAGCTCATG
CCGCTCTTTC GGCACGAAGA GAATGACCGC TTGTGGAACT TTAGCGGGCG GCGCGAAGCG
TTAGCAGCGG CGCGCGATCT GATTGAAGGC GCTGAACGTG AGTTGATGCT GGTGCTGACC
GACGCCGATG TTGAAGCACT CTATCCGGCG TTGGCTGCCG CCCATGCGCG TGGGGTTGCG
CTGGGGGTGA TTCTCACCGG TGAAGCGCCC TTTTCGTTTG GCCAAGTGGT GCGCCACCCC
AAACGCGAGA CCGAGCTGCA CGGCATGGTT GAGACGCTGA TCGTCGTGGC CGATGAGCGA
GAGTTTCTGA TCGCTTCCGG CCATCTGGCG ACAACGGCCA CCGTCACTAC CAACCGCAAC
ATGGTCTTGA TCGCGCGCCA GTTTATCTGG ATGGAGTTGT TTGCACAGCG CATCTTTGCC
CGATTAGGCG AAGACCTACT CGCCCGTCTC GATCCAGAAG ATCGACAAGT TTTGCATTCG
TAG
 
Protein sequence
MVETNLLEQL TALGLTEYEA RVYLALLTDY PATGYQISKL AGVPRSMVYE ALGRLEARGA 
VLKSVEEKAT LYRPISPAIL LDRYEREAHE RAEVLRNQLM PLFRHEENDR LWNFSGRREA
LAAARDLIEG AERELMLVLT DADVEALYPA LAAAHARGVA LGVILTGEAP FSFGQVVRHP
KRETELHGMV ETLIVVADER EFLIASGHLA TTATVTTNRN MVLIARQFIW MELFAQRIFA
RLGEDLLARL DPEDRQVLHS