Gene Cagg_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0813 
Symbol 
ID7268265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1012591 
End bp1013940 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content55% 
IMG OID643565663 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002462172 
Protein GI219847739 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCG CATGGCTTTG TGAACGGATG GAACAGTGGG CCAATCACCC GGCCATTGTG 
TGGCATGACC ATCCATACAC TTACCACGAT CTACTGGCCC GTATGCAAGC GTGGAAGGCA
ACGCTCAACG AACACGATAT TGGCCCCGGA CAGGTCGTAA CGATAGAAGG CGATTATTCA
CCAAACGCGG TTAGTCTCCT CTTAACACTC ATCGAGCGCA GCACGATTGT GGTGCCGCTC
ACCCGCAGCG TGGCCGCGCA GCGCGAAGAG TTCCTCACTA TCGCCGAAGT GCAGGTCGTG
GTGAGCTTTG ATGATGATGA TGATCGGTGG CACATCGAGC GACGACCGGT GCCGGTTACC
AATCCGCTGA CCCGCCAACT GATCGAATGT GGTCATCCCG GTCTCGTGCT CTTCTCGTCG
GGATCGACCG GGAAGAGTAA AGCGGCTTTG CACGATTTTT TACCACTGCT CGAAAAATTC
CAAGTGCCGC GCCATCGTCG GGTTACGCTT ACCTTTTTGC TCCTCGACCA TATTGGCGGG
ATCAACACCC TCTTCTACAC GCTAGCCAAC GGTGGGACGG TAGTGGCCGT GCAATCACGC
GATCCTGATG TTGTTTGCCG CACCATCGAG ATGCACCGAG TGCAAACCCT CCCCACCTCA
CCAACCTTTC TCAATCTCTT ATTAATATCC GAAGCATACC GACGGTATGA TCTCTCGTCG
CTTGAGCTGA TCACCTACGG TACCGAGGTG ATGCCGGAGA GCACCCTGCA CCGTATTCAC
GACATCTTCC CGAATGTGCA GCTTTTACAG ACGTATGGTC TCTCAGAGCT AGGCATCTTG
CGTTCAAAGT CACGCGACTC CAACTCGCTA TGGTTCAAGG TCGGTGGCGA GGGCTTCGAG
ACGAAGATCG TCGATGGTGT GCTGTGGGTA CGGGCTAAAT CTGCAATGCT TGGCTACCTA
AACGCGCCTA GTCCGTTCGA CGAAGAGGGC TGGATGAACA CGCAAGATGT CGTTGAGGTT
GATGGAGACT ACATCCGCAT TCTGGGGCGG CGCAGCGATA TTATCAACGT TGGCGGGCAG
AAAGTTTACC CGGCGGAAGT AGAGAGTGTG TTGTTACAGA TGCCGAATGT GAAGGATGTG
GCCGTCGTGG GTGAGCGTAA TCCAATCACG GGCCAGATCG TCACTGCCCG CTTTAATCTG
TTCGAGCCAG AAGACCCCAA CGAATTTAAG CGCCGGGTGC GTGCCTTCTG TCGAGAGCGG
CTCGCTCCCT ACAAAATTCC GGTCAAGATT ACCATCACCG AGGACGAACA GCATAGCGCC
CGATTTAAAA AGATGCGGAA GCCATGGTAA
 
Protein sequence
MSIAWLCERM EQWANHPAIV WHDHPYTYHD LLARMQAWKA TLNEHDIGPG QVVTIEGDYS 
PNAVSLLLTL IERSTIVVPL TRSVAAQREE FLTIAEVQVV VSFDDDDDRW HIERRPVPVT
NPLTRQLIEC GHPGLVLFSS GSTGKSKAAL HDFLPLLEKF QVPRHRRVTL TFLLLDHIGG
INTLFYTLAN GGTVVAVQSR DPDVVCRTIE MHRVQTLPTS PTFLNLLLIS EAYRRYDLSS
LELITYGTEV MPESTLHRIH DIFPNVQLLQ TYGLSELGIL RSKSRDSNSL WFKVGGEGFE
TKIVDGVLWV RAKSAMLGYL NAPSPFDEEG WMNTQDVVEV DGDYIRILGR RSDIINVGGQ
KVYPAEVESV LLQMPNVKDV AVVGERNPIT GQIVTARFNL FEPEDPNEFK RRVRAFCRER
LAPYKIPVKI TITEDEQHSA RFKKMRKPW