Gene Cagg_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0793 
Symbol 
ID7268112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp984417 
End bp986900 
Gene Length2484 bp 
Protein Length827 aa 
Translation table11 
GC content55% 
IMG OID643565644 
Producthypothetical protein 
Protein accessionYP_002462153 
Protein GI219847720 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.526313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTC CATCACTCCA AGCGATCGGT AAATATCTCG GACTGACACT CCTGAGTGGC 
AGTATTCTGG CTTTGCAGAT TACCTTCACC CGCATTTTTT CACTGATGAT TTGGCACCAC
TTCACGTATA TGGTTATCGG CATCGCCTTG CTCGGCGGCG GGGCAGCCGG AACCTTTCTC
GCGGTGCGTC GTTGGGAACC TGATAAACTT CAGCGCCGTC TTGGCACATT GTCTTTACTC
TTTAGTCTTT CCAGCTTGAG CAATCTGATC GCGATCACAA CCATCGCCAT TGATCCGTTA
CGGGCCGCGC AGATCGGCTG GGCTATCGTC GGTCTCGGCA TCTACTTCAT CTGTCTTTTC
AACACCTTCT TTACCGGCGG GTTGGTGATT GCTGCCATCT TTGGGCGCTG GGCCGGCGCT
GCCCACCGGC TCTATTTTGC CGATATGCTG GGGGCAGGTG TGGCCACGAT GACGGTCTTG
TTCGTCATCC AGACCATTGG CGGCCCGGCG GTCATTGCCT TGATCGGGCT GATCGGTGTG
GTGGCAGCGA TATTGCTGGA CTACCAGGCC AAACCACGCC AACGTTGGCT CTTGCCTGTC
ATCATTGGTA TAGAGATGCT CGTGTTAGTG GGACTGATCG TGCGGCCACC CACACTTGCC
GTGCCCAGCT CAAAGGAGCT GGGTTGGGCG ATGCAAGCCC AAGGTACCGG CCCCGAATTC
ACTCGCTGGG ATGCGGTAGG GCGGGTGGAT GTGATGCCGG AGATCGTGAT TACCGAACCA
ATGATTGTGG GAGCGGTAAG TTCGAGCTAT CTCCGAGAAA ACCGACCGGA ACTACCGTTA
AAATTGGTAA CTATTGACGG CACTTCTATG ACCGGCATGT ACCGGTTTGA TGGTAGTGAT
ACGGATCTGG AGCGATTCCG CTTTCTTGAT CACGCAGTGA TCAGCGCCGC GTACCAACTC
GGTAAAGAAC GACCACGTAC TTTACTGATC GGAGTTGGCG GCGGTCTTGA TATTCTACTG
GCCCGCCTCT ATAAAGCACA ATACATTACG GCCATCGAAC TCAATCCGAC CATTGTCAGC
CTGTTGAAAG ATCGTTATGC CGACTACACC GGACGGCTAG CCGAACACCC TTCAACAGAG
CTGATCGTCG CTGAAGGTCG TAGCTTCCTT AGCCGCACCA CAAACCAATA CGACATCATT
CAAGGCATCG GTCTTGACAA TTTGGCTGCT TTGTCGGGTG GGGCCTACGT GCTCGCCGAA
TCGTACCTCT ACACGGCCGA TTCGCTCGAG CAAGCGCTGA ACGCGCTTAC CCCGCATGGG
ATTTTCTCGT GGACGCGCGA TGTCAACAGC CCGCCGCGTG AAATGTTGCG CTTAACCGGA
CTAGCTGCGG AAGCACTCCG CCGAATAGGG GTCAGTGATC CGGCAGCACA TATCGCAATC
ATCGCCAATG AGAGTGGAGT TAATGCCACA TTGCTCGTCA GTCGGTCACC ATTCCAACCG
GAGCAGATCG AACGGCTCCG CGCATGGGGC GCAGCGAACA ACTTCACGAT GCTACACGAT
CCGTTTGTTC GGTTGAACAC CCCATTTGCC GACTACTTGC ATGCCGCCGA TCCACGAGCC
TTTGAGCGCA CCTATCCGTT CCACATCTTC CCGGTGACCG ATGACAACCC CTTCTTCTAC
AACTACTTCC GTTGGGAGAA CTTACACTTC GATCGCAGTT ATGAGGGGCG GCTAAACCGC
TTCCCAATCG GTAATCTGAT ATTGGTGACA ATGGCCTTCT TCGCACTCGG AGCAGCGGTA
GCCTTCATTG TGTTGCCATT GGCGCGCTAC AAGAGCGATG GGCTGCGTAT GCCCGGCGCA
ATACCAACCC TTGCCTACTT CAGCTTGCTC GGTGCGGCGT ATATGTTTAT CCAGATTGTG
CTGATTCAGC GATTTACCCT CTTTATCGGT TATCCGATTC ACGCGACAAC AGCGACTATC
GCGAGTATGC TTGCCTTTGC CGCACTAGGC AGCCTACTCT TCAGCAAGCG CATCCAGACT
ATCGGTGGGC TGCGGCTGGT GTTACTCGGT ATTGCAGTGC TCACTGCGAT CTACGTTGTT
GCGCTAAAAC CGCTCTTTGC GGCGTGGATG CATTGGCCTG ATTTGGGGCG GATCATCGCC
AGCATCTTTA TTATCGCACC ACTCGCCGTG CTGCTCGGTA TTCCTTTCCC AACAGGCATT
CGCCAACTCA ACGCGCGCGC ACCGGGGTTG GTGGTCTGGG CTTGGGGAAT GAACGGCGTC
TTTTCGGTAC TTGGATCGGT ATTGGTGATT GTGGTCAGTA TGGTGAGCAA TTTCACCACT
GCGATGCTGA GCGGAGCAGC CGGCCACACG CTAGCGGCTA TGGTTGGCGG CGCGCTCTGG
AAGGTAGCGG TGCGTGATCC GGCAACCGTT AGCGTACCAG CGAATGCTGC GACTGATACG
TCGGTGACTC CAGTTGCAAG ATGA
 
Protein sequence
MTFPSLQAIG KYLGLTLLSG SILALQITFT RIFSLMIWHH FTYMVIGIAL LGGGAAGTFL 
AVRRWEPDKL QRRLGTLSLL FSLSSLSNLI AITTIAIDPL RAAQIGWAIV GLGIYFICLF
NTFFTGGLVI AAIFGRWAGA AHRLYFADML GAGVATMTVL FVIQTIGGPA VIALIGLIGV
VAAILLDYQA KPRQRWLLPV IIGIEMLVLV GLIVRPPTLA VPSSKELGWA MQAQGTGPEF
TRWDAVGRVD VMPEIVITEP MIVGAVSSSY LRENRPELPL KLVTIDGTSM TGMYRFDGSD
TDLERFRFLD HAVISAAYQL GKERPRTLLI GVGGGLDILL ARLYKAQYIT AIELNPTIVS
LLKDRYADYT GRLAEHPSTE LIVAEGRSFL SRTTNQYDII QGIGLDNLAA LSGGAYVLAE
SYLYTADSLE QALNALTPHG IFSWTRDVNS PPREMLRLTG LAAEALRRIG VSDPAAHIAI
IANESGVNAT LLVSRSPFQP EQIERLRAWG AANNFTMLHD PFVRLNTPFA DYLHAADPRA
FERTYPFHIF PVTDDNPFFY NYFRWENLHF DRSYEGRLNR FPIGNLILVT MAFFALGAAV
AFIVLPLARY KSDGLRMPGA IPTLAYFSLL GAAYMFIQIV LIQRFTLFIG YPIHATTATI
ASMLAFAALG SLLFSKRIQT IGGLRLVLLG IAVLTAIYVV ALKPLFAAWM HWPDLGRIIA
SIFIIAPLAV LLGIPFPTGI RQLNARAPGL VVWAWGMNGV FSVLGSVLVI VVSMVSNFTT
AMLSGAAGHT LAAMVGGALW KVAVRDPATV SVPANAATDT SVTPVAR