Gene Cagg_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0660 
Symbol 
ID7266911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp813749 
End bp814762 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content54% 
IMG OID643565521 
ProductABC transporter related 
Protein accessionYP_002462031 
Protein GI219847598 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.209902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000264016 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAGT CGATAGCATC GGCTATCGTT GTGCGTGATC TGGTCAAAAC GTATGAAGTT 
CCCGAACGCA ATGCCGGTCT GTGGGCAGCA GTACGTAGTC TGTTTCAGCG TCGGGTACGC
GCCGTCTGCG CGGTGGCCGG AGTTAGTTTT ACGATCCAAC CGGGTGAAGT TGTTGGGTTT
CTTGGCCCCA ATGGTGCAGG TAAGACCACC ACGCTCAAGA TGTTAACCGG CTTGTTGCAT
CCAACAAGTG GTGAAGTACG GGTATTCGGT TCCATCCCGG CTCGGCGTGA GCCGGCGTTT
TTGCGTCGGA TTACCTTGGT TATGGGTAAC CGTAATCAGT TACAGTGGGA TCTACCGGCA
CTTGATTCGT TTGAGTTGAT CCGGGCAATT TACCGCTTGC CACCCGCCGA ATTTCGCGCT
ACCCGCGATG AATTGATCGA GCTGCTGGAA GTAGGTGATC TGGTGCGCAA GCCGGTACGG
AACCTTTCGC TGGGTGAGCG GATGAAAGTG GAGATCATCG GTGCTCTGCT CCATCGACCA
CAAGCGCTGT TTCTCGATGA GCCGACACTC GGTCTCGATG TGACGATGCA ACGCCGGATT
CGGGCATTTA TTGCCGAATA CAATCGGCGT ACCGGCGCAA CGGTGTTGCT TACCAGTCAC
TATATGGCCG ATGTAGAAGC ACTTTGTCGC CGGGTGATCG TCATTCATCA CGGACAAGTG
CTCTTCAATG GCCCCTTAAG TGCATTGGTC GATCAATTTG CCGCATATCG TCAGTTGGTT
GTCACGTTGG CGGAACATGG AGTTGATTTG ACGGTGTTTG GTGAAATTAT TGAACGCGAT
GGTTTGCGCT ACACATTACG GGTGCCGAAA GCGATGGTCC CGGCTCTTAC TGCCCGTCTG
TTAGCCGAAG CACCGGTGAC CGATCTGACG CTGGAAGAGC CGCCGATTGA TGATGTTATC
GAACAGGTGT TTGCAGTTGG CTCGGCAAAG ACGGTACACG AAGCCGCACA GTGA
 
Protein sequence
MSESIASAIV VRDLVKTYEV PERNAGLWAA VRSLFQRRVR AVCAVAGVSF TIQPGEVVGF 
LGPNGAGKTT TLKMLTGLLH PTSGEVRVFG SIPARREPAF LRRITLVMGN RNQLQWDLPA
LDSFELIRAI YRLPPAEFRA TRDELIELLE VGDLVRKPVR NLSLGERMKV EIIGALLHRP
QALFLDEPTL GLDVTMQRRI RAFIAEYNRR TGATVLLTSH YMADVEALCR RVIVIHHGQV
LFNGPLSALV DQFAAYRQLV VTLAEHGVDL TVFGEIIERD GLRYTLRVPK AMVPALTARL
LAEAPVTDLT LEEPPIDDVI EQVFAVGSAK TVHEAAQ