Gene Cagg_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0640 
Symbol 
ID7266112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp787788 
End bp788960 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content58% 
IMG OID643565501 
ProductPT repeat-containing protein 
Protein accessionYP_002462013 
Protein GI219847580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTA GAATTATTCC AATAGCCCTG TTGCTGTGTC TCGTACTGAT CGGTGCGTGC 
AGTTCGGCGG CGGCAAATGA ACCGGTGCCG TCACCACAGC CAACTGTCCC CCAGTTCCAA
TTGGCAACGA AGACACCAAC ACCATCGGCC ATCCCAACGC TACCGCCTAC TGCCACTCCT
GAATCGACAG CTACGCCAGC AGCAACTGCG ACTCCCGAAC CAACCGCCAC CCCCGAACCA
ACCCCAACGC CAGAACCAAT TACTGCACCA CTTGCCGTTC CACGTGGTTC GGTGACCAGC
CGACCTTTCG CCGTGATGTA CGACAACCAT CCCAATGCCT ACCCACAAAC CGGGATGGAC
GGAGCGGCTA TCGTGTTCGA GGCATTAGCT GAGTTCGGCA TTACCCGCTA TATGGCCATC
TTTATTCCCG GCATTTCACC TGATATGCCG GTGATCGGCC CGGTACGCAG TGCTCGCCCA
TATTACGTCG AGTGGGCCAA AGGGTTTCGA GCGGTGTACG TGCATGCTGG CGGCTCTCCC
GAAGGCTTGT TGTTGGCCGA AACATCTATC GAACTGATCA ATATGGACGC ACTACGCGGC
AATGCCAGCG GGTATTTCTA CCGCACCCGC GACCGCAGCG CGCCGCACAA CCTTTACACC
AATAGCGCCA ATATTGCCAA GTTCGCCGCG GCAAATGATC GCCCGGTGGA GGGATTGGCT
GAGATCGGTT TTGTCTACTC ACCCGAAGCT CCAGCCGAGG CCCGTCCTAG CCGTCAAGAG
TTACGCTACT TCTTTATCTA TCGCGAAGCA GCCGTAGGTT GGCGCTATGA CCCGGCAACC
AACAGTTATC TCTATTTCCG TGGCAATCGT CCGCACGTCG ATGCTACCAC CGGCGCGCAA
TTGCAGTTCA AGAATGTTGT GATCCTCGAA GTACCCGAAC GCCCTATCCC CAACGATCCA
AAAGGGCGCA TCGAGCAAGA TGTGATCGGC GAAGGCCCGG CCCGTATCTT CCGCGATGGC
CGGATGATCG AGGCTACATG GCGCAAGGCA GCCGGCTATG CCCAGCTCTA CCTTATGGAT
GCAGACGGCA ACGAAGTGCC GCTCGCGCCC GGCTCGGTCT GGATCGCTGC TATTCCCGAC
CTCGCCAATC TGACGGTTGA GGGCGGGCGC TAA
 
Protein sequence
MKSRIIPIAL LLCLVLIGAC SSAAANEPVP SPQPTVPQFQ LATKTPTPSA IPTLPPTATP 
ESTATPAATA TPEPTATPEP TPTPEPITAP LAVPRGSVTS RPFAVMYDNH PNAYPQTGMD
GAAIVFEALA EFGITRYMAI FIPGISPDMP VIGPVRSARP YYVEWAKGFR AVYVHAGGSP
EGLLLAETSI ELINMDALRG NASGYFYRTR DRSAPHNLYT NSANIAKFAA ANDRPVEGLA
EIGFVYSPEA PAEARPSRQE LRYFFIYREA AVGWRYDPAT NSYLYFRGNR PHVDATTGAQ
LQFKNVVILE VPERPIPNDP KGRIEQDVIG EGPARIFRDG RMIEATWRKA AGYAQLYLMD
ADGNEVPLAP GSVWIAAIPD LANLTVEGGR