Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0590 |
Symbol | |
ID | 7266062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 730200 |
End bp | 733691 |
Gene Length | 3492 bp |
Protein Length | 1163 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643565453 |
Product | transcriptional activator domain protein |
Protein accession | YP_002461965 |
Protein GI | 219847532 |
COG category | [K] Transcription |
COG ID | [COG2909] ATP-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.422877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC TGGCCGAGCA AGCGCCATCG GTTGCGGTAG GCACCACCAT TTTACCTCTC AAGATCACAC CGCCGCCGGT ACGGCGAGAG GAAATCCTTC GTCGTGATTT GCAGGCGTTG CTGACCGAGG TACGCTTATT ACCGGTAACG GTCGTCGTTG CCCCGGCCGG CTATGGCAAA ACAACACTCC TCGCACAATG GGCTGACCAA CTCACGCACA CCGGTGCCCA GGTGGCGTGG CTTGGGTTCG ATGCGAATGA TCAAGAGCCG GCCTTACTGT TAACGTACTT GATTGCGGCC ATCCGGCGTT TACTCCCTAC CGCCGGTGAG CAAGCGTTGC GTCTCTTACA GAGTCTGTCC AGTCTTAAGC ACAACTGGCC ACTGGTTGCC GGTGCATTAC TGAGTGATGT ACAACGTGAA TTGCAGTCAC CGGCTATTTT GATGCTCGAC GACGTACATC TTGTCAGTGA AGGCCCGATA ACTACCGAAC TGTTAGGTTA TCTTCTCCGT GCCGCACCAC CGAATTTGCA TATTGTGATG GCTTCGCGCC GGCCCCTGAC GTTTACGCCA CTGCCGCGTT TGCGCGCCGA GGGTGGATTG CTTGAGGTTG GTGCGTCTGA TCTCTTGTTG CAGCGCGATG AGGCGGTTGA GTTGTTAGCG CGCGTCGGTG TGGTATTGCC CGATGATGAA CTTGACCTGT TACTCGAACG GACCGGCGGC TGGATGTTGA GTGTGCAGTT GGCGGTGCGT ACATTGGCGC GCCAGACCCC CGAACAACGT CGGAGGTATC TCCAGGGCCT GGCAACAAAT CAGCACGATC TCTTTGAGTA TTTGGCATCG GAAGTGTTAG GCATGCTCCC GAGCCACTTA GTTGACCGTC TGATCTGTAC GGCATTGTTT GGCCAAGCCA TCCCCTCACT CCTTGATGAG GCCCTAGGGG TTGACGATAG CGCGCAACTG CTCGAGCAAG CAATTGATTT TGGTCTACCG CTCACCGTTG AAACCGATGG TACTTCCGGT GAACGGGTGT TTCGCTTCCA TCCGCTTTGG CAGCGCTTAC TAGCCGATCG GGCCCTATTG CGCTTCGACC GAGTCTTTGT TCGTGAGCTT CACGAACGGT TTGGGATGAC ACTGGCCCGG CACGATCAGA TCGAATCGGC TTTGCGTCAT CTGGCCGCGG CGGAAAATCC AGCAGCGATT GCCTATGCCT TGCGCGAGTA TGCATGGCCG CTGATCGATT CTTCTCAACG CGAGAGTCTG CGCAATTGGA TCGAACGCTT ACCGCCAGAT GTGCGTGAGC GTGATCCAGA GCTGCTCCAT ATGTACGGAT GGAGCTTTTT TAATACCAAT CGGGAACGTG CATTACAGTT GATCGCGCAA GCTGCCGAAC AGTATCGATT GGCCGGCGCC ACCGATCAAG AAATGCGCGC GTTGCGCGAT ATGGCTGTCT TGCTCTTTTG GGCCGATTCG CCGGCCGAGT TTGCGCGCGT GTGCCGGCGA GTGATCGAAG CCGCAACCCG CATCAACGAT GCCTGGTCGC GTGGTGCAGC ACTGGTTGGG TTCATGGCGT TGCTCTATAG CCAAGGGCGG TTCCGGGCCG CGTTGCGGGT AGGACGGTGG GCGGAACGGT GGCCACTGAG TGTGCTTTGG CAGTGGTTGT TGGCAGTATT GCGGTCGTCC ATCTATGTGC AGCAGGGTTA TCCGGCCGAG GCACTGACGG CCATTCGCGC TGCTCTTGAT CTGCCCCGGA TTGATCGCAA CGATATGCTG CGTCAGTCGT TGTTGTTGTT ACAGGGGTTA GCCCTCTATC AGCAGGGGCA GAGCGAAGTT GCTCTTGATC AAGTCCAAGA GTGTTATTTT CGCCTGAATG ATTACGTTCC CGGCAGTGTG TTGACCGGTA ATGCGGTGCT GATACTGGCG TTACTCTTGA TCGAACACGA GCGCTTTGAT GAGGTGGCGA CGTATCTGCA ACGGGCACGG CAAATTGCGA GTCAGCTTGA TGACCGGTTG TTAGGAATGC GGGTGCGTGT CGTTGAGATT TACGCCGCGT TACGAAGCCA ATCGCCGTCG GCTGCTGCAC AAGCTGTTGC ATTTTGGCAC AAATTACGCG AATACTCCGA TCCTAATACA CCGGTGGCCC GCGAGAGTGA CTTGCAGTCT TTCCAGGTAC ACGATGCGTG GATGCAGACT CTGTTGCTGA TCGTGATGGG TGAAGGTGGT GAGACTGAAC AAGCCTTGGC GATGGCTGAC TCATTGCTCG AGTTTATGGT TCGCCGTCGC GATGGTCTGT TTCAGGCGGT TATCCACCTC TACCGCGCCT ACCTGATGTT CCAGCAACAA CCGCACGTGG AGGCTGTGGC CGATGATATT CGTATCGCCT GTACGATCTG CGATCGTGCC GGCGTAGAAT CGTTGCCCTT CCTACCGCGT CCGGTTATGC TTTGGGCCAT CCGAATGGCA TTACAGATTG GTCTGTCGAG CCGGGCAATG ATTGCTGCGT TGCGCAATTT CGATGCTGCA ACCCTAACCT CTATCCTGGT GCCACTTCTC GATGAGTCGT ACCCAACGAC ACTCCGGGTA CGTATCGCCG GCTTGGTTGG TGAGTTGGGG TTGGTTCAAG CCTACAGTAC ATTACGTTCG TTATTGAAGG AACGTGTGTC AGACGTTCGG CAAGCCGCTG CTGATGCGCT GGAGCGGCTG GCCTATCGTC CGCCATACCG GCTGATCATT CGTGCGCTCG GTGGGTTTCA GGTGTTGCGC GGCGATCAAG AAGTGCGTGA ACGGGATTGG CGCAGTATCA AAGCACGCCA TCTGCTTCAG CTCCTCCTGA TTGAGCGGGG CCGAATGTTG TCGCGCGATC AAATTATGGA TATGCTCTGG CCCGGCCTTG AGGGTGATTC GGCATCGAAT AATCTGCGCG TGACCATTAG CCGGCTCATT AAAGCACTCG AACCGAATCG CCCTGAAGGC GCACCAACCT ACTACATTTT GCAACAGGGT GATACCTACG GTTTCAACGT TGATAGCGAC CATGAATACG ATGTTGCCAC CTTCGTGCAA GCGGTGGAGC GCGGGCAACG TGCGTTACAG CGTAACCAAT ATGGAGAGGC ACGTGAAGCA TTCCAACAGG CTGTGACGCT CTATACCGGT CCCTTCTTAC CCGACAGTCT CTACGAGGAT TGGTCGGTGG TTGAGCGTGA ACGGTTAGGG TTGCTGTTTA ACGATGCCGC CCTTAGTTTG GGCCGCCTCC TGTTTGAAGA AGGTCACTAC CGAGAGGCAA TTACGTTAGG GTGGCGCGTT CTGGAATATG ATAAAGCCCA AGAAGAGGCA TATCAGTTGC TGATCCGGGC GTATGGGGCA ATTGGTGAGC GCGGCACAGC GATCCGGCTG TATAATCGCT GTGTTGCCGC GCTACGTGAT GAGTTGGGCG TCGAGCCACT GCCGGAGACC ACTGCGCTGG TTGAACAGGT GCGTGGACGC CGGTCTTCGT AG
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Protein sequence | MTDLAEQAPS VAVGTTILPL KITPPPVRRE EILRRDLQAL LTEVRLLPVT VVVAPAGYGK TTLLAQWADQ LTHTGAQVAW LGFDANDQEP ALLLTYLIAA IRRLLPTAGE QALRLLQSLS SLKHNWPLVA GALLSDVQRE LQSPAILMLD DVHLVSEGPI TTELLGYLLR AAPPNLHIVM ASRRPLTFTP LPRLRAEGGL LEVGASDLLL QRDEAVELLA RVGVVLPDDE LDLLLERTGG WMLSVQLAVR TLARQTPEQR RRYLQGLATN QHDLFEYLAS EVLGMLPSHL VDRLICTALF GQAIPSLLDE ALGVDDSAQL LEQAIDFGLP LTVETDGTSG ERVFRFHPLW QRLLADRALL RFDRVFVREL HERFGMTLAR HDQIESALRH LAAAENPAAI AYALREYAWP LIDSSQRESL RNWIERLPPD VRERDPELLH MYGWSFFNTN RERALQLIAQ AAEQYRLAGA TDQEMRALRD MAVLLFWADS PAEFARVCRR VIEAATRIND AWSRGAALVG FMALLYSQGR FRAALRVGRW AERWPLSVLW QWLLAVLRSS IYVQQGYPAE ALTAIRAALD LPRIDRNDML RQSLLLLQGL ALYQQGQSEV ALDQVQECYF RLNDYVPGSV LTGNAVLILA LLLIEHERFD EVATYLQRAR QIASQLDDRL LGMRVRVVEI YAALRSQSPS AAAQAVAFWH KLREYSDPNT PVARESDLQS FQVHDAWMQT LLLIVMGEGG ETEQALAMAD SLLEFMVRRR DGLFQAVIHL YRAYLMFQQQ PHVEAVADDI RIACTICDRA GVESLPFLPR PVMLWAIRMA LQIGLSSRAM IAALRNFDAA TLTSILVPLL DESYPTTLRV RIAGLVGELG LVQAYSTLRS LLKERVSDVR QAAADALERL AYRPPYRLII RALGGFQVLR GDQEVRERDW RSIKARHLLQ LLLIERGRML SRDQIMDMLW PGLEGDSASN NLRVTISRLI KALEPNRPEG APTYYILQQG DTYGFNVDSD HEYDVATFVQ AVERGQRALQ RNQYGEAREA FQQAVTLYTG PFLPDSLYED WSVVERERLG LLFNDAALSL GRLLFEEGHY REAITLGWRV LEYDKAQEEA YQLLIRAYGA IGERGTAIRL YNRCVAALRD ELGVEPLPET TALVEQVRGR RSS
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