Gene Cagg_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0468 
Symbol 
ID7266636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp579855 
End bp580199 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content57% 
IMG OID643565331 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_002461845 
Protein GI219847412 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.984402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0359796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAT TATCGATTGC GCACAACATC GTCAATATCG CCAGTGCTGC CGCTGCCGAA 
GCCGGCACCG AAGAGATCAG CGCTGTCTAT TTGCGGATTG GCGCACTGGC TGGCGTAGTC
GCCGATGCGC TCCGGTTTAG TTTTGCGATT GCCGCTGAAG GTACGCCGCT GGCGAACGCC
GAATTGATTA TTGAAGAGGT GCCGGTGACG GTCTTTTGCC CCACCTGCAA CACCGAAGTC
ACGCTTCCCA ACCCTCGCCT CTTCCGCTGC CCACACTGTG GCCGGCCATG CGGTCAGATT
ATTCATGGGC GTGAATTGGA ACTAGTCGCA TTGGAGACAC CATGA
 
Protein sequence
MHELSIAHNI VNIASAAAAE AGTEEISAVY LRIGALAGVV ADALRFSFAI AAEGTPLANA 
ELIIEEVPVT VFCPTCNTEV TLPNPRLFRC PHCGRPCGQI IHGRELELVA LETP