Gene Cagg_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0293 
Symbol 
ID7267474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp369079 
End bp369915 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content56% 
IMG OID643565162 
Producthypothetical protein 
Protein accessionYP_002461676 
Protein GI219847243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC GTATGATTAG TTACAGCATG ATGATCTGTG GGATTGTGGC GATGATGATC 
GGTTTCACCC TCTTGCCGCT GCCGACGTCT TCAACCGCCG CACCGGCCTT ACAACCATCA
CCACGCCCCA CGATTCCGCC GGTAACGGTG ATCCCGTATA GCGAACCAAC CCCGGTACCG
ATGGGACGGA TCACCGGAAC CATTATCGAT CTGCGCACCC ATGCTCCGAC ACCCAATATC
GCTGTACAGA TCGGGGATGC TGTAGTCTAC AGCGATGCCA ATGGCAACTA TGATCGCTGG
GTTGAGTCGG GCTACTACAC TGTCACCCTC CAATTACGCG ACGATCATGG TTCACCCGGT
CAACCACCAC TCAACATTGC AGTCGGCCCC GGTGATACCG TGGTGGCCCA TCTCTTCTTT
ACCAGTCCGG CACCCAACGA ATCATCAGCT CCTATAACGA TCGAGGCACC TACTACCGAA
CCGATAAGCG AGCCGGTGGC AGTTGTACCG GCATTACCAG AGGTCATTCC ACCCAAATTG
CCGTATACCG GCGTTGCAGA TACACCTACC ACCACCATCG ATCGACAACC CACCTTTCTA
CCGCGCACCG CAACCACCAT CCCGTTCAAT GCCCAATTCT GGTTTGTGGT TGGCTTTATC
CTGCTTGCCG GCGGGCTTGG TTTACAGTTC TGGCCGGTTC GCCGCAACGC ATCATCTGCG
GCGCATGAGC GCATCTTGGC CGAACTGCTT AGTACACCGC CGCCGCCGTT GCATCATCAT
GATGATGAGC TGCTGTATAC GCTCTTAACG CAGCACGATG CACACGATAA GCGGTAG
 
Protein sequence
MQRRMISYSM MICGIVAMMI GFTLLPLPTS STAAPALQPS PRPTIPPVTV IPYSEPTPVP 
MGRITGTIID LRTHAPTPNI AVQIGDAVVY SDANGNYDRW VESGYYTVTL QLRDDHGSPG
QPPLNIAVGP GDTVVAHLFF TSPAPNESSA PITIEAPTTE PISEPVAVVP ALPEVIPPKL
PYTGVADTPT TTIDRQPTFL PRTATTIPFN AQFWFVVGFI LLAGGLGLQF WPVRRNASSA
AHERILAELL STPPPPLHHH DDELLYTLLT QHDAHDKR