Gene Cagg_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0106 
Symbol 
ID7266844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp149233 
End bp150642 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content57% 
IMG OID643564978 
Productglycosyl transferase group 1 
Protein accessionYP_002461494 
Protein GI219847061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.341014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.913948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGC GGATCGCGTA TTGCTCGCCT GTTAACCCGG CTGCGTCGGG TATTTCCGAC 
TATAGCGAGG AGCTGTTACC TTATCTTGCC CAATACGCCG ACATCACTCT GCTTGTCGAC
GATGGGCTGC ATCCGACGAA TCCGTTCCTT CGTCAGTACT TAACCATTCA ACCCCTGCGC
AAACTCGAAC ATTTTGTTCG GCGCGGGGCA TTCGATGCAA TTGTCTACCA CATGGGCAAT
AGCCCGGTTC ACGCCAGAAT ATGGCAGTCA GCCCAACGTA TTCCCGGGGT GGTGGTGTTG
CACGACTTTG TGTTACACCA CTTTATGCTC TGGTATGCCG CGAACGTTCA GCGTGATGTG
CAGCGTTATG TGACGATGAT GCGCACACGC TACGGAGATG AGGGGTGGCA TGTTGCTCAG
CTCATGATCC GCTCACGTTT TAGTGCGGCT GCTTTTAACT TTCCGTGCAA CGAAGATGTG
CTCGCTGCTG CCCAAGCCGT GATCGGTCAC AGTCGGCATA TCCTCGATCG CGTGGCCGCG
ATCCGTCCCG ATCTGCCCCG TGGTCTCGTG CCGATGGGTA TTCCCTTACC ACCACTGATT
GACCGCAACG AGGCCCGTCA ACGGCTTGGT ATCCCGCTCG ACCGTCCACT ATTGGCGAGT
TTTGGTCATA TCAATGCGTG GAAGCGGATC GAGCCAATGC TGCGTGCGCT TGCTCTCCTG
CGTCGCGAAG GTATTGACGC CCATTGTGTG CTCGTAGGTT CGGTGTCACC AAACTATGAC
CTCGATAGCC TAATCTGGCG TCTTGGCCTG CAAACGGCGG TAACGGTGAC CGGGTATGTT
CCAAGAACGC AATTTGAGTA CTACGTGGCG GCAGCCGACA TTTGTTTCAA TTTGCGCTAC
CCAACTGCCG GTGAAACGAG TGCCAGTCTA TTGCGACTGC TAGGTGCCGG CAAACCAACG
CTGGTCAGCG CGGTCGATGC GTTTTGCGAA TTACCTCCTG ATGTTGCCGC GCAGGTTGAT
GTGGACGGGA GTGAGATCGA CTTAATCGTC GCCTATTGCC GACGGTTATT GTCCGATCGC
TCCTTGGCTG CGGCGTTGGG GGCACGGGCG CGGGAATATG TTGCCACCGA ACATACCCTC
CCCGGTGCCG CACAGGCGAT GATCCGCTTT TTGGCCGACG TATACGGTTG GCCGCCACCT
CGCTTGATCC ACCCCCAACC CCTCTGGGAT CCAACACCGG TCTGTGAACC GGAACCGGTA
GAAACGTCGG CGCCAACGAT AACTGCACCT GCCCAGCCAT CGCTTCTGAT ACAATCGGCA
GCCCGCGCTG CTGCAGAGAT CGGTCTGACC GAAGACGATA CAGATGCGCT GCGTTCGGTA
GCGGTGCGGA TTAACGAATT AACCGCATGA
 
Protein sequence
MMPRIAYCSP VNPAASGISD YSEELLPYLA QYADITLLVD DGLHPTNPFL RQYLTIQPLR 
KLEHFVRRGA FDAIVYHMGN SPVHARIWQS AQRIPGVVVL HDFVLHHFML WYAANVQRDV
QRYVTMMRTR YGDEGWHVAQ LMIRSRFSAA AFNFPCNEDV LAAAQAVIGH SRHILDRVAA
IRPDLPRGLV PMGIPLPPLI DRNEARQRLG IPLDRPLLAS FGHINAWKRI EPMLRALALL
RREGIDAHCV LVGSVSPNYD LDSLIWRLGL QTAVTVTGYV PRTQFEYYVA AADICFNLRY
PTAGETSASL LRLLGAGKPT LVSAVDAFCE LPPDVAAQVD VDGSEIDLIV AYCRRLLSDR
SLAAALGARA REYVATEHTL PGAAQAMIRF LADVYGWPPP RLIHPQPLWD PTPVCEPEPV
ETSAPTITAP AQPSLLIQSA ARAAAEIGLT EDDTDALRSV AVRINELTA