Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0096 |
Symbol | alaS |
ID | 7266834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 135513 |
End bp | 138197 |
Gene Length | 2685 bp |
Protein Length | 894 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643564969 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_002461485 |
Protein GI | 219847052 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.172086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAC TGACCGCCGC TCAGATTCGT GAAACGTTCA TATCGTTTTT TAAGCGCCAT GGCCATACCC ATGTACCCAG CTCGTCGTTG GTTGTCGCCG ACGATCCAAC GTTGCTGTTC GCTAATTCCG GCATGGTGCA GTTTAAAGAT GTTTTTTTGG GTCGCGAACA ACGCCCGTAT ACTCGTGCTG TAACTGCCCA AAAGTGTTTG CGTGTTAGCG GTAAACACAA CGATCTCGAA GAAGTTGGCC CCTCACCACG CCACCATACC TTCTTTGAAA TGTTAGGCAA CTTCTCGTTC GGCGATTACT TCAAAGCCGA GGCGATTCGA TTGGCGTGGA AATTGCTAAC CGAAGAGTTC CAGTTGCCGG TCGAAAGACT TTGGTTTACG GTGTTTGCCG GCGATGATGA AGTGCCACCT GATGATGAGG CGGCAGCGTT GTGGATCGCG CAAGGCGCCG ACCCGTCGCG GGTGTTGCGC TTTGGCCGTA AAGACAACTT TTGGGTGATG GGCGATACCG GTCCCTGTGG TCCATGCTCG GAGATTACCA TCTACATCGG TGATGATCTG AGCCAAATGC GTGCCGAGGG CGTTAATTCC GACGATCCGA ATTATGTCGA GATCTGGAAT AATGTGTTCA TGCAGTACGA CCGCGCCACC ATGCAGCCGC TACCACGGCC TTCGGTCGAT ACCGGTATGG GTCTTGAGCG AATGGCAATG GTGATGCAAG GCGTCCATAG CACGTATGAT ACCGATCTGT TCGTGTCCAT TATTAACCGT ATCATTGCCG TGCGCGGTAG CGACGAAGAG CATTATCAGG CCCATCGCAG CGCGTACCGT GCTATCGCCG ACCACTCACG TGCAATTGCG TTCTTGATCG CCGATGGGGT TTTGCCCGGT AATCTGGGCC GTCCGTATGT GTTACGCCGT ATTTTGCGCC GAGCCGCGTA TCAGGGTCGC ACGATTGGCT TTGAACGGCC ATTCCTCGCC GAGGTGATTA CAACGGTGAT CGATCAAATG GGTGAGGTGT ACCCCGAATT AGTAAATCGA CGCGAACTTA TCTTGAGTGC CGCCGACCAG GAAGAGCGCC AATTTTTGCG TACTCTGAGC GGTGGCCTGA GCCGCCTCAA TGCTGTGATT GAGCAGGTAC GTACCCGTGG CGAGACGGTG ATCCCCGGTA CCGATGCGTT CGTGCTGAAA GACACGTATG GCTTTCCCCT CGATTTGACC CAGAAGATTG CTGCCGAACA AGGGTTGACA GTCGATGAAG CCGGTTATGA GGCGGCAATG GCCGAACAAC GCGCTCGTTC ACGAGCGGCG GCGGCCGGGA AGCGTGGCGG TGAAGCCGAT CTGTGGGCCG AACTTGATCT GCCTGCGTCG CACTTTACCG GCTACGAGCG CTTGAGCGAC CGAGCAACGG TGATCGGTAT GTTGGCCGAT GGCGATGCGA TTACGTCTGC GATGGTCGGA CGGCAAGTGC AAATTGTGCT CGATACGACG CCTTTCTACG CCGAAAGTGG CGGTCAGGTT GGTGATACCG GCGTGCTGGT CGGGCCAGAG GGTTCGGTGC AGATCGAAGA TACCCGCCGG CCATTGCCCG GTCTGATCGT TCACTATGGT CGTGTGGTCA GCGGTACGAT CCATGTAGGC GATCAGGTGC AGGCTACGGT TGATATGGTA CGGCGGGCCG ATATTCAGCG GAACCACACT GCGACCCATA TGCTTCAGCG CGCCTTACGC GACGTGCTCG GCGAACACGC GGCGCAAGCC GGTTCGTTGG TGGCGCCCGA CCGGCTGCGC TTCGACTTTA CCCATACTAA ACCGCTCGAT CCCGAAGAAT TGCGTGAGAT CGAGCGCCGT CTGAATGCGT GGGTCCGCGC CGATGCATCG GTACGCTGGG AAATTACCGG TTACCGGTCT GCCATAGCAC GCGGTGCGAT CGCGCTGTTT GGCGAGAAGT ACGGTGATAC CGTGCGCGTC GTGACCATTG AACGCGGTAC CGGAATTGAG AACGGTGAGT ACGCTTCTCG TGATAGCCTT GAGCTGTGCG GTGGCACACA CGTGAATCGC ACCGGTGAGA TTGGGTTTGT CCGCATCCTC GGTGAAGGGA GTATCGGTAG TGGGATTCGT CGCGTTGAGG CTCTGACCGG GCGTGGCGCC GAGTTATGGG CAGAAGAACA AGCACAGACG TTACGCGACC TGGCTGCACG GATCAATGCG CAACCTGCAC AACTGATCGA ACGAATCGAG GCGCTTTTGG CCGAGAACCG GCAACGACGG CAAGAGCTGG AGGCGCTGCG GAGTAAGTTG GCGCGCGAGA TGCTTGATAC CCTGGTACAT CGCACGCAAA CGGTCGCCGG GATTCCGCTG CTGGCAGCAG AGGTGGAAGC CGATTCGGTC GAACGCCTGC GTGAGATGGG TGAATATCTG CGCGATAAGC TGGGTAGTGC CGTGATTGTG CTTGGCGCTC AGATCAACGG TAAACCGCAA TTACTTACAA TTGTTACGTC CGATCTGGTC AAGCGAGGCC TGAATGCAGT GCATATTGTC AAACCGCTTG CCGCTATCGT CGGTGGTGGT GGTGGTGGCC GACCGGAAAT AGCGCAAGCC GGTGGACGGA CCCCCGACCG CTTGGCGGCT GCTATCACTG CTGCGGTAGA CGTGTTGGCC GAACAGGTAG GATAG
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Protein sequence | MQKLTAAQIR ETFISFFKRH GHTHVPSSSL VVADDPTLLF ANSGMVQFKD VFLGREQRPY TRAVTAQKCL RVSGKHNDLE EVGPSPRHHT FFEMLGNFSF GDYFKAEAIR LAWKLLTEEF QLPVERLWFT VFAGDDEVPP DDEAAALWIA QGADPSRVLR FGRKDNFWVM GDTGPCGPCS EITIYIGDDL SQMRAEGVNS DDPNYVEIWN NVFMQYDRAT MQPLPRPSVD TGMGLERMAM VMQGVHSTYD TDLFVSIINR IIAVRGSDEE HYQAHRSAYR AIADHSRAIA FLIADGVLPG NLGRPYVLRR ILRRAAYQGR TIGFERPFLA EVITTVIDQM GEVYPELVNR RELILSAADQ EERQFLRTLS GGLSRLNAVI EQVRTRGETV IPGTDAFVLK DTYGFPLDLT QKIAAEQGLT VDEAGYEAAM AEQRARSRAA AAGKRGGEAD LWAELDLPAS HFTGYERLSD RATVIGMLAD GDAITSAMVG RQVQIVLDTT PFYAESGGQV GDTGVLVGPE GSVQIEDTRR PLPGLIVHYG RVVSGTIHVG DQVQATVDMV RRADIQRNHT ATHMLQRALR DVLGEHAAQA GSLVAPDRLR FDFTHTKPLD PEELREIERR LNAWVRADAS VRWEITGYRS AIARGAIALF GEKYGDTVRV VTIERGTGIE NGEYASRDSL ELCGGTHVNR TGEIGFVRIL GEGSIGSGIR RVEALTGRGA ELWAEEQAQT LRDLAARINA QPAQLIERIE ALLAENRQRR QELEALRSKL AREMLDTLVH RTQTVAGIPL LAAEVEADSV ERLREMGEYL RDKLGSAVIV LGAQINGKPQ LLTIVTSDLV KRGLNAVHIV KPLAAIVGGG GGGRPEIAQA GGRTPDRLAA AITAAVDVLA EQVG
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