Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0088 |
Symbol | |
ID | 7266826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 123895 |
End bp | 124809 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643564961 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002461477 |
Protein GI | 219847044 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACTG AGTGGCGCAG CCAACTAAGC AGACAGTGGC GCAAAGAGGC GAGCGCATAC GGCTTCATTG CCCCGTATGC GGTGCTGTTC ACCATCTTTA TCGCGATTCC GGTGCTGGCA GCCTTCTTGC TCTCGTTCAC CTTTTTCGAC TCGATCCAGC CGCCGCAATT CAACGGCTTA CTCAACTATA TCGTGTTGCT GACCCAAGAC GACATCTTTA TGCGTTACGT CTTGCCCAAC ACGATCCAGT TTGCGGTGCT GGTCGGGCCG GGGGGCTATG TGCTGGCCTT TTTGCTGGCG TGGATGTTGG CCCAATTGCC GCGCACGCCG CGCACCATTT TCGCCCTTAT CCTCTACTCG CCGTCGATGA CCGGCGGCGT AGCGATGGCG GTGGTCTGGC AGACGCTGTT TAGCGGCGAT CAGAACGGCT ACCTCAACAG TTTTCTGCTC AGCTTGAACC TGATTCAAGC GCCGATCCAG TGGCTGCAAT CGCCAGAGTA TTTGATGACG ATTATGATCA TCGTCACCTT GTGGAGCAGT ATGGGAGTCG GCTTTTTGGC CATGCTGGCC GGCATGCTCG ACATCAATCC CGAATTATAC GAAGCCGGCG CGCTCGATGG GGTCAGCAGT CGCTGGCAAG AGATCATCTA CATCACCATC CCATCAATGA AGCCGCAGAT GCTGTTTGGC GCGGTAATGG CAATTGTCGG CGCGTTTCAG GCCGGTACTA TCGGGGTTGC CCTGTCAGGT AGCAACCCGA CACCACAATA CGCCGGCCAA CTGATTGTCA ACCATATCGA AGACTACGGC TTTCTACGCT ACGAAATGGG TTACGCCGCC GCCGTTTCGG TGGTGCTGTT GTTGATGGTG TTGCTGTTTA ACCGGCTGGC GAACAAACTG TTCCGCGAGG ATTGA
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Protein sequence | MQTEWRSQLS RQWRKEASAY GFIAPYAVLF TIFIAIPVLA AFLLSFTFFD SIQPPQFNGL LNYIVLLTQD DIFMRYVLPN TIQFAVLVGP GGYVLAFLLA WMLAQLPRTP RTIFALILYS PSMTGGVAMA VVWQTLFSGD QNGYLNSFLL SLNLIQAPIQ WLQSPEYLMT IMIIVTLWSS MGVGFLAMLA GMLDINPELY EAGALDGVSS RWQEIIYITI PSMKPQMLFG AVMAIVGAFQ AGTIGVALSG SNPTPQYAGQ LIVNHIEDYG FLRYEMGYAA AVSVVLLLMV LLFNRLANKL FRED
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