| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1939 |
|---|
| Symbol | |
|---|
| ID | 3746699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2471042 |
|---|
| End bp | 2471794 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637774474 |
|---|
| Product | lysophospholipase L2, putative |
|---|
| Protein accession | YP_380230 |
|---|
| Protein GI | 78189892 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1647] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAC CAAAGCCACA TACCCTTGCT GTGCTTGTAT TGCATGGTTT TTCGGGAACG
CTTGAAAGCG TTAAGGCATT GCGCGAGCCA TTGCAAGCGC TTGGCTTGCC TGTGGCAATG
CCGCTTTTGG CTGGGCATGG GGAGCATTCG CCTGAGGCTT TGCGTGGTGT TACATGGGAA
ACGTGGCTTG CCGATGCTGA AGAGGCACTG CTTCAGTTAT CCAATCAAGC TCTGCAAGTG
ATTGTTATTG GGCATAGCAT GGGTGCTCTC TTAGCAGTGC AGTTAGCTTA TCGTTATCCT
ACGTTGGTTG ATTCATTAGT GCTCGCAGCT CCTGCATTAC GCATCGCCTC CATTTTTGCG
CCCGGGCGCT TATTCCACAG TATTGCGCCA ATAGTAAGCC GATTGGTGAA AAATTGGCGT
TTGCAAAGTG AAGAGGATAG GCGTAATGCG GTGTATGGTG ATTTGCATTA TGAGTGGGTG
CCCACAAAAA CCGTGCTCTC ATTTTTTGAG TTGGTGAAAA AAACAGAGCG ACTTTTGCCG
CACATTACCC ATCCCGCATT GATTTTGCAC TGCCGTTGCG ATAATACGGT GTTGCCTGAA
AGTGCAGAGA TTGCGCACAG TAGTTTAGGT TCTATGCCTG CCGCAAAATC GTTAGTGTGG
TTTGATAAGG TAGGGCATCA GCTTTTTTGT GCTACCGAGC GCGATTGTGT TGTGCTGGAA
ATTGTAGGGT TTGTAAAAAG TCGTTTTAGG TGA
|
|---|
| Protein sequence | MPEPKPHTLA VLVLHGFSGT LESVKALREP LQALGLPVAM PLLAGHGEHS PEALRGVTWE
TWLADAEEAL LQLSNQALQV IVIGHSMGAL LAVQLAYRYP TLVDSLVLAA PALRIASIFA
PGRLFHSIAP IVSRLVKNWR LQSEEDRRNA VYGDLHYEWV PTKTVLSFFE LVKKTERLLP
HITHPALILH CRCDNTVLPE SAEIAHSSLG SMPAAKSLVW FDKVGHQLFC ATERDCVVLE
IVGFVKSRFR
|
|---|
| |