Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1935 |
Symbol | |
ID | 3747310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2467670 |
End bp | 2468335 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637774470 |
Product | succinate dehydrogenase, cytochrome b558 subunit |
Protein accession | YP_380226 |
Protein GI | 78189888 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCTCGA ATTTATTTCT CTCCTCTCTT ACAGCAAAAG TGCTTATGGC ACTTGCGGGG CTTTTTTTGC TGACCTTTCT TTTTCTTCAT TTAACGCTCA ATTTGCTGCT GCTTTTGCCC GATGGTGGGC AGGCATTTAG TACGGCGGCG GCATTTATGG GGGCAAATCC GCTCATAAAA ATTGCTGAGG TATTTCTTAT TGCCTCTTTT GTGCTGCATG GAGTGCTCGG TTTTATGCTT TCAGCGAAAA GCCGTGCGGC GCGTCCAGTG GCGTATGCAA CGGCAAACCG TTCCGATACG GCGCTCTTTT CCCGCTACAT GCTCCATTCA GGCATCATTA TCTTGCTCTT TCTTTTGTGG CACAGTGTTG ATTTTTACTT TATAAAACTT GGTATTGTGC TACCTCCAGC GGGCATTGAA CCGCACGATT TTTATCAGCG TGCGCTTCTT CTTTTTACCC ATCCGGGCAT TTCTCTCTTT TACCTTCTCT CTTTTATTGC GCTTGGTGTG CATGTGAACC ATGCTATGCA ATCGGCGTTT CAAACGTTGG GCTTGCACCA TAGTCGCTAC GTTGATGGCG TAAAGTTGGC AAGTTCGCTT ATTGCCATTG TTATTGCTAC GGGTTTTTCA ATTGTGCCTA TCGTGCTATG CTTTTTCCGT CCGTAA
|
Protein sequence | MRSNLFLSSL TAKVLMALAG LFLLTFLFLH LTLNLLLLLP DGGQAFSTAA AFMGANPLIK IAEVFLIASF VLHGVLGFML SAKSRAARPV AYATANRSDT ALFSRYMLHS GIIILLFLLW HSVDFYFIKL GIVLPPAGIE PHDFYQRALL LFTHPGISLF YLLSFIALGV HVNHAMQSAF QTLGLHHSRY VDGVKLASSL IAIVIATGFS IVPIVLCFFR P
|
| |