Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1808 |
Symbol | |
ID | 3746923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2329365 |
End bp | 2330834 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637774346 |
Product | glycogen synthase |
Protein accession | YP_380102 |
Protein GI | 78189764 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0297] Glycogen synthase |
TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGAC GAAATAGTAA AGTTCTTTAT GTTTCAGGTG AAGTTGCCCC TTTTGTAAGA ATCACTGCCC TCGCTGATTT TATGGCTTCG TTTCCTCAAA CAGTTGAAGA TGAGGGATTT GAAGCTCGCA TTATGATGCC AAAGTATGGC ATTATCAACG ATCGTAAGTT CCGCTTACAC GATGTGCTTC GCCTCTCCGA TATTGAAGTT CACCTCAAGG ATAAAGTGGA TATGCTTGAT GTGAAAGTTA CCGCTTTGCC CTCAAGTAAA ATTCAGACCT ATTTTCTCTA CAATGAAAAA TATTTCAAGC GCCATGCGTG GTTTCCTGAT TTAAGTACAG GAAATGATGC TCGCGTAACG GTTGAAAAAA TTGTTTTTTT CAACGTTGGT GTGCTTGAAA CCTTACTCCG TTTGGGTTGG AAGCCCGATA TCATTCATTG CAATGATTGG CATACAGCGC TCATTCCCTT GCTTTTAAAG ACGATGTATG CGTCGCATGA GTTTTTCCGC AATGTTAAGA CGCTTTTTTC TATTCATAAT GCCTATCGGC AGGGAAATTT TCCCCTCAAG CATTTTCAGC GCTTGCTGCC CGATGAGGTA TGCGCAGGCT TGCATTGTGT AAAGGATGAG GTGAATCTTC TTTTTACGGG CATTGACCAT GTTGAGCTGT TAACCACCAC ATCGCCTCGC TATGCTGAAT GCCTACGTGG TGATACGCCT GAAGCCTTTG GAGTAGGTAA ACGTTTATTG GAGCGGGAGT TACCGTTGCA TGGCATGGTT AATGGGCTTG ATGCACGGCA ATGGAATCCC GCAATAGATA AGATGATTAA AAAGCGTTAT TCAACCGAAA ATATGAATGG CAAGGTTGAA AATCGCAAAA TGCTCTTAGA GGAAATGAAG TTACCATGGC GTGATGGTAT GCCGCTTGTC GGTTTTATTG CCACGTTTGA TGATTATCAA GGTGCTAAAC TTTTAGCCGA TTCACTCGAA AAACTGATAG CGCAAGATAT TCAACTTGTT ATTATTGGGT TTGGGGATAA AAAGTGTGAG CAACGTTTTC AAGAATTTGT GGTAGCTCAT CCGGAACAGG TAAGTGTGCA AGCTGAGTGC TCCGATTCAT TTTTACATTT AGCAATTGCT GGGCTTGATT TACTGCTTAT GCCAAGCAAA GTTGAGTCGT GCGGTATGCT GCAAATGAGT GCCATGACGT ATGGCACCAT TCCAATTGCA CGCGCAACGG GTGGCATTGT TGAAACCATT CAAGATCACG GTGAAAATTT AGGTACGGGC TTTTTGTTTG ATGATTATAG TGTAGAGGGG CTCAGTGGGC GTCTTGCTGA TGCATTGCGC TGTTTTCATG ATGACGAGTG TTGGCCTGCA TTGGTTGAGC GTGCCATGAG TAGTGATTTT AGTTGGCACA ACACGGCAGA GGCGTATGGG CAGTTGTACC GCAATCTTCT TGGCAAATAG
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Protein sequence | MSRRNSKVLY VSGEVAPFVR ITALADFMAS FPQTVEDEGF EARIMMPKYG IINDRKFRLH DVLRLSDIEV HLKDKVDMLD VKVTALPSSK IQTYFLYNEK YFKRHAWFPD LSTGNDARVT VEKIVFFNVG VLETLLRLGW KPDIIHCNDW HTALIPLLLK TMYASHEFFR NVKTLFSIHN AYRQGNFPLK HFQRLLPDEV CAGLHCVKDE VNLLFTGIDH VELLTTTSPR YAECLRGDTP EAFGVGKRLL ERELPLHGMV NGLDARQWNP AIDKMIKKRY STENMNGKVE NRKMLLEEMK LPWRDGMPLV GFIATFDDYQ GAKLLADSLE KLIAQDIQLV IIGFGDKKCE QRFQEFVVAH PEQVSVQAEC SDSFLHLAIA GLDLLLMPSK VESCGMLQMS AMTYGTIPIA RATGGIVETI QDHGENLGTG FLFDDYSVEG LSGRLADALR CFHDDECWPA LVERAMSSDF SWHNTAEAYG QLYRNLLGK
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