Gene Cag_1782 details

Gene Information

• Locus tag: Cag_1782
• Symbol: ispF
• ID: 3747202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2300836
• End bp: 2301309
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637774320
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_380076
• Protein GI: 78189738
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAATTG GAATAGGAAT TGATGTACAC CCCTTTGCCG CTGGACGTAA ATTAGTAATT 
GGCGGCGTCT ATATTCCCGG ACACGATGGT TTAGATGGGC ATAGCGATGC CGATGTATTA 
CTCCATGCCA TTAGCGATGC ACTGCTTGGC GCAGCCGCAC TTGGCGATAT TGGGCTTCAC 
TTTCCCAACA CAAGTGCAGA GTTTAAGGAT ATTGATAGCA TGATTTTGCT CAAGCATGTA 
GGAAAGTTGC TTGCAGAGCA TGGTTATGCG CCAGTAAACG TTGATGCCAT GCTTTTGCTT 
GAAGCGCCTA AAATTGCGCC TTACATTCAG CAAATGCGTC AAAACATTGC AGATGCTCTT 
GGGCTTCAAG TCGGCGATGT TGCCGTAAAA GCCACCACCA ACGAAAAGCT TGGCTACATT 
GGTCGCAAAG AGGGAGCTGA AGCACACGCG GTATGTTTGA TTCAGGGGAA GTAA 

 

Protein sequence

MRIGIGIDVH PFAAGRKLVI GGVYIPGHDG LDGHSDADVL LHAISDALLG AAALGDIGLH 
FPNTSAEFKD IDSMILLKHV GKLLAEHGYA PVNVDAMLLL EAPKIAPYIQ QMRQNIADAL 
GLQVGDVAVK ATTNEKLGYI GRKEGAEAHA VCLIQGK