| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1692 |
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| Symbol | metH |
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| ID | 3746382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 2196259 |
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| End bp | 2199933 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637774230 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_379987 |
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| Protein GI | 78189649 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACCA TGATTCAGCG TCATAAACTA AAAGAAGAGG ATTATCGAGG CAGTCGTTTT
GCTGACCACT CTCATCCGCT GCTTGGCAAT AACGATATGC TGGTGCTCAC CCAGCCTGAT
ATTATTTACA CCCTCCATTG TGCATTTCTT GAAGCTGGCT CCGATATTAT TGAAACCAAT
AGCTTTAACG CTAATCCAAT CTCTCAAGCT GATTATAGTG CGGTTGAGCT GGTGCATGAG
CTGAATGTGG AGGCATGTCG CCTTGCTCGC CGTGCGGCTG ATGAGTTCAG TGCTAAAACC
CCCAATAAGC CTCGTTTTGT TGCGGGTTCG ATTGGTCCAA CCAACAAGAC CCTCTCCCTT
TCGCCCGATG TGAATCGTCC GGGCTACCGT GCCGTAACGT TCCGTGAAGT GGTTGATAAT
TACCTTGTGC AGCTTGAGGG ATTGCGCGAA GGTGGTGTTG ATCTGCTTTT GGTGGAAACG
GTTTTTGATA CGCTGAACTG CAAGGCGGCG CTTTTTGCTA TTAGCGAAAT TTTTGAGCGC
ACGGGTTGGC GTGTACCGGT GATGGTATCG GGTACGGTGG TGGATGCAAG CGGACGCACG
CTTTCGGGGC AAACAACGGA GGCATTTTGG TCATCGGTGT GCCATCTGCC AGAATTACTC
TCAATCGGCT TGAACTGTGC TCTCGGTTCA AAGCAAATGC GTCCGTTTAT TGAAGCAATG
GCAAATGTTG CCGAAAGCTA CGTGAGCGTT TATCCTAATG CGGGTTTACC AAACGAGTTT
GGGCAGTATG ACGATTCGCC CGAATACATG GCTACACAAA TTGCTGACTT CGCCACGTCG
GGCTTTGTCA ATATCGTTGG TGGCTGTTGC GGAACTACTC CCGACCACAT TAAAGCTATT
GCAGAAGCGG TTCAAACCAT TTCGCCTCGC AAACGTCCTA CCAAAAAGCA TGAATTGCTG
CTCTCTGGGC TTGAACCACT TGTAGTCAAT CACACCACAG GTTTTATCAA TATTGGTGAG
CGTACCAACG TTACAGGCTC TAAAAAATTT GCTCGCCTTA TCAAAGAAGG GAATTATGAT
GAAGCGCTCT CCATTGCTCG CCAGCAAGTT GAAAATGGTG CGCAGGTGAT TGATGTAAAT
GTGGATGAGG GAATGTTGGA TTCCGAAAAG GTGATGAAGG AGTTCCTTAA CCTTATTGCT
TCCGAGCCTG AAATTTCGCG CGTGCCCATT ATGATTGATA GCTCGAAATG GTCAGTTATT
GAAAGTGGGT TGCAATGCGT GCAAGGCAAG GGCATTGTTA ATTCTATCAG CTTAAAAGAG
GGTGATGAAC TTTTCCGCGA ACGTGCCCGC AAAATTTTAC GCTACGGTGC AGCTACCGTT
GTGATGGCAT TTGACGAGCA AGGGCAAGCC GATAATTTGC AGCGTCGTAT TGAAATTTGC
CAACGAGCGT ACAACATTTT AGTCAACGAA GTTGGTTTTC CGCCTGAAGA TATCATTTTC
GATCCCAACG TTTTAACCGT TGCTACGGGT ATTGAAGAGC ACAACAACTA CGCCGTTGAC
TTTATCGAAT CCGTTCGCTG GATTAAAGAA AATCTGCCCC ATGCAAAAGT ATCGGGCGGT
ATTAGCAACG TCTCCTTCTC TTTCCGTGGC AACGAACCCG TTCGTGAAGC AATGCACGCC
GCATTCCTCT ACCACGCCAT TCGTGCAGGG CTTGATATGG GCATTGTTAA TGCAGGTCAG
CTTGCTATTT ATGAAGATAT TGAGCCAGAG CTGCTTGTTC GTGTTGAGGA TGTGCTCTTA
AACCGTCGTG CCGATGCAAC CGAACGCCTT GTGAGCTTTG CGGAAACCAT TGCTACGGGT
GGCGAAAAAG TTGAGGCAAA AGCGGCTGAG TGGCGCAACT TGCCCGTTGC AGAGCGCTTA
CGCCATGCGC TTATTAAAGG CATTGTGGAA CACATTGAAG AGGATACCGA AGAGGCGCGT
CAGCTCTATC CAAGTCCGCT TCAGGTAATC GAAGGTCCTT TGATGGATGG CATGAATGCT
ATTGGCGACC TTTTTGCAGT GGGCAAAATG TTCCTGCCGC AAGTGGTAAA AAGCGCCCGT
GTAATGAAGC GCTCAGTTGC TCATCTTATC CCCTTTATTG AAGCTGAAAA AGCCAAAAAC
AAAGATACCA GCGCCCAAGC AAAAGTGCTG CTTGCTACCG TTAAAGGCGA TGTGCACGAT
ATTGGCAAAA ACATTGTAGC TGTTGTGCTT GCTTGCAATA ACTACGAGGT GATTGATATT
GGCGTCATGA TGCCATGCGA AAAAATTCTT GAAGCGGTTG AGCGCGAAAA AGCCGACTTG
CTTGGTTTGA GCGGACTTAT TACCCCATCG CTTGATGAAA TGGTGCATGT AGCGGCTGAA
ATGGAGCGAC GTGGCATGAA GATTCCGCTC TTGATTGGCG GTGCAACTAC CTCGCGTATG
CACACTGCCG TAAAAATTGC ACCGGTTTAT TCGGGAGCTG TTGTGCAAGT GCTTGATGCT
TCTCGTAGCG TGCCCGTAGT CAATAGCTTG CTGAATCCAG CACTAAGCCC AAAATACATT
GCTGACTTAA AGAATGAGCA AGCAGGCTTA CGCGAAAGCC ATGCCGCTGC ACAAGCTGCT
CGCAACTATG TGTCGCTTGC CGATGCGCGT AACAATGCTG CTAAAGTGGA GCCTGTTGCA
GTTCAACCCA AAAAAGTTGG ACTAACACTT TTTGAAGATG TAGCGGTTGC CGAACTTCGC
GCTTACATTG ATTGGACGCC ACTCTTTATG ACGTGGGAAT TGCATGGGCG CTATCCGCAA
ATTTTAAGCG ATGCCAAATA TGGCAGTGAA GCGCAAAAGC TCTTAAACGA TGCCAACGCT
TTGCTTGACC GAATCGAACT GGAAAAGCTG CTCGGAGTAA AAGGGGTTGT TGGCATTTTC
CCTGCCAATA GTACGGGAGA TGATATTGCC ATTTACACCG ATGAAAGCCG CACCAAAGTG
CTGACCACCT TGCACACCTT GCGCCAGCAG CAAGAAAAAG CAAACGGTGA AGCGAATGTT
GCCCTTGCCG ACTTTATTGC CTCTGCCGAC TCAGGTGTTG CCGATTACCT TGGCGCATTT
GCCGTTACCA CAGGGCTTGG CATTGCAAAA ACGTTAGAGC GCTTTGTGGC AGAACATGAC
GATTACCATC GCATTCTTAT GCAAACCGTA GCCGATCGCC TTGCTGAAGC TTTTGCTGAA
ATGCTGCACG AGTGCGTGCG CCGTGAGGTG TGGGGTTACG AAGAGGTTTG CTCTAAAACA
TCCTCCTGCT GTGCCTGCCA TGCTGAAAGT GCTACAACAA GCCAAGCAAA CCATCTTGAA
GAACTGCTTG CTGGCAACTA CCAAGGCATT CGCCCAGCAC CGGGTTATCC CGCCTGCCCT
GACCATAGCG AAAAAGCGGA AATCTTTACC TTGCTGAATG CTGAAGTTAA TACAGGCATT
ACGCTAACCG AGAACTTTGC CATGAATCCC GCAGCATCAG TAAGCGGCTT GTACCTTGCT
CATCCCGAAG CGCGTTACTT TATGTTAGGT AAAATCGGCA AAGATCAAGT GGAAGATTAT
GCGCAGCGCA AAGGCATTAA CGTTGCTGAA GCTGAAAAGT TGCTTGCGAC TTCGCTGAAT
TATCAAGCAG GGTAA
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| Protein sequence | MGTMIQRHKL KEEDYRGSRF ADHSHPLLGN NDMLVLTQPD IIYTLHCAFL EAGSDIIETN
SFNANPISQA DYSAVELVHE LNVEACRLAR RAADEFSAKT PNKPRFVAGS IGPTNKTLSL
SPDVNRPGYR AVTFREVVDN YLVQLEGLRE GGVDLLLVET VFDTLNCKAA LFAISEIFER
TGWRVPVMVS GTVVDASGRT LSGQTTEAFW SSVCHLPELL SIGLNCALGS KQMRPFIEAM
ANVAESYVSV YPNAGLPNEF GQYDDSPEYM ATQIADFATS GFVNIVGGCC GTTPDHIKAI
AEAVQTISPR KRPTKKHELL LSGLEPLVVN HTTGFINIGE RTNVTGSKKF ARLIKEGNYD
EALSIARQQV ENGAQVIDVN VDEGMLDSEK VMKEFLNLIA SEPEISRVPI MIDSSKWSVI
ESGLQCVQGK GIVNSISLKE GDELFRERAR KILRYGAATV VMAFDEQGQA DNLQRRIEIC
QRAYNILVNE VGFPPEDIIF DPNVLTVATG IEEHNNYAVD FIESVRWIKE NLPHAKVSGG
ISNVSFSFRG NEPVREAMHA AFLYHAIRAG LDMGIVNAGQ LAIYEDIEPE LLVRVEDVLL
NRRADATERL VSFAETIATG GEKVEAKAAE WRNLPVAERL RHALIKGIVE HIEEDTEEAR
QLYPSPLQVI EGPLMDGMNA IGDLFAVGKM FLPQVVKSAR VMKRSVAHLI PFIEAEKAKN
KDTSAQAKVL LATVKGDVHD IGKNIVAVVL ACNNYEVIDI GVMMPCEKIL EAVEREKADL
LGLSGLITPS LDEMVHVAAE MERRGMKIPL LIGGATTSRM HTAVKIAPVY SGAVVQVLDA
SRSVPVVNSL LNPALSPKYI ADLKNEQAGL RESHAAAQAA RNYVSLADAR NNAAKVEPVA
VQPKKVGLTL FEDVAVAELR AYIDWTPLFM TWELHGRYPQ ILSDAKYGSE AQKLLNDANA
LLDRIELEKL LGVKGVVGIF PANSTGDDIA IYTDESRTKV LTTLHTLRQQ QEKANGEANV
ALADFIASAD SGVADYLGAF AVTTGLGIAK TLERFVAEHD DYHRILMQTV ADRLAEAFAE
MLHECVRREV WGYEEVCSKT SSCCACHAES ATTSQANHLE ELLAGNYQGI RPAPGYPACP
DHSEKAEIFT LLNAEVNTGI TLTENFAMNP AASVSGLYLA HPEARYFMLG KIGKDQVEDY
AQRKGINVAE AEKLLATSLN YQAG
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