| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1297 |
|---|
| Symbol | |
|---|
| ID | 3747445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1761182 |
|---|
| End bp | 1762381 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637773834 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_379600 |
|---|
| Protein GI | 78189262 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.311384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCCT CTCTTTACTC TGCACCCGAT GCTGCTGGAC ACTACGGCTA TTTTGGCGGC
AAATTTATTC CAGAAACGCT TATTAAAAAT GCGGCTGATT TAGAGGCTGA ATATTTACGA
GCCAAGCAAG ACCCCGCTTT TCAGCAAGAG TTAACGCTGT TGCTGCGCGA CTATGTTGGT
CGTCCTACGC CGCTCTACCA TGCAACGCGT TTAAGCCAAC AAGTGCAAGG AGCGCAAATT
TATTTAAAGC GCGAAGATTT GTGCCATACA GGTGCGCATA AAATTAATAA TGCCCTTGGT
CAAGTGCTGC TTGCTCGACG CATGGGCAAA AAGCGCGTTA TTGCTGAAAC AGGTGCAGGG
CAGCATGGGG TTGCAACGGC AACGGTGTGT GCGCTTTTTA ATTTAGAATG CGTGGTTTAT
ATGGGCGAAG AGGATATTTG CCGTCAAGCG CCAAATGTTG CACGCATGAA GCTCTTGGGT
GCTGAAGTGC GAGCCGTAAG CAGTGGTTCG CGAACGCTTA AAGATGCCAC CAGCGAAGCA
ATTCGCGATT GGATGAATAA TCCCGAAGAG ACCTTTTACA TTATTGGATC AGTGGTTGGA
ATGCACCCCT ACCCCATGAT TGTGAGAGAT TTTCAATCAG TAATTGGGAA GGAAACTCGG
CAGCAAATTA TTGCACAAGC GGGTCGTCTG CCGGATGTTA TTACCGCTTG TGTTGGTGGT
GGCAGCAATG CCATTGGTAT GTTTTATGAA TTTTTAAAGG ATGCCGCAAT GGTTGAATTG
GTGGGGGTTG AAGCTGCGGG CGAAGGGCTT ACAGGGCGCC ATGCCGCATC ACTAACGCTT
GGAACGCCCG GCGTATTGCA TGGAGCCTTA ACGCGCCTTC TCCAAAACAA TGACGGGCAA
GTGCTTGAAG CACACTCCAT TTCAGCGGGG TTAGATTACC CGGGTGTTGG GCCTGAACAT
TGCTATTTGC AAGAGCTTGG CTTGGTTTCT TACACCTCCG TTACCGACAC CGAAGCGCTT
GAAGCCTTAG CCACGCTTGC TAAAACGGAA GGCATTATTT GTGCCTTAGA GTCAGCTCAT
GCAATTCATT ATGCCATCAA ACGAGCAAAG CAAATGGCGC ACGATGGAAT TTTAATTGTC
AACCTGTCGG GCAGGGGCGA TAAAGATATG GAGACCATTA TTCGCGAATT GGGGTTGTAA
|
|---|
| Protein sequence | MEPSLYSAPD AAGHYGYFGG KFIPETLIKN AADLEAEYLR AKQDPAFQQE LTLLLRDYVG
RPTPLYHATR LSQQVQGAQI YLKREDLCHT GAHKINNALG QVLLARRMGK KRVIAETGAG
QHGVATATVC ALFNLECVVY MGEEDICRQA PNVARMKLLG AEVRAVSSGS RTLKDATSEA
IRDWMNNPEE TFYIIGSVVG MHPYPMIVRD FQSVIGKETR QQIIAQAGRL PDVITACVGG
GSNAIGMFYE FLKDAAMVEL VGVEAAGEGL TGRHAASLTL GTPGVLHGAL TRLLQNNDGQ
VLEAHSISAG LDYPGVGPEH CYLQELGLVS YTSVTDTEAL EALATLAKTE GIICALESAH
AIHYAIKRAK QMAHDGILIV NLSGRGDKDM ETIIRELGL
|
|---|
| |