| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1243 |
|---|
| Symbol | |
|---|
| ID | 3748281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1705687 |
|---|
| End bp | 1706619 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637773781 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379547 |
|---|
| Protein GI | 78189209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000429592 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACA TGCAACTCCC ACCAAACCAG CGCGACAACT ACGACAGCCC TTGGAAAGAG
GCAATTGAGC ACTACTTCCC CGAATTCATG GCATTTTACT TTCCCAATGC CCACAAAGCT
ATTGATTGGG CAAAAGGCTA CCACATCCTC AACGAAGAAT TGCGCTCACT TATACCCGAT
GCCGAAATCA GTAACCGTGT AGTTGATAAA TTAGTGCAGG TACATCTCTT GGATGGCAAC
GAAAGCTGGC TTTATATTCA CATAGAGGTG CAAAGTTTTT GGGAGGCTGA CTTTCCCAAA
AGAGTATTCA TCTATTTTTA TCGTATTTTT GACAAGTATG GAAAAGCCGT TGCAAACTTT
GTTGTGCTGG CTGATATGAA TCCCCACTGG CTTCCCACAT CGTATAACAT GGAAACCATT
GGCAGCAAAC TAACGTTAGA TTTTTCAGTG GTAAAGCTGC TGGATTTTGA ACCACACATG
CAGGAACTGC TTGCCTCCAA CAATGTGTTT GGGCTCATTA CGGCAGCACA CTTGCTCACG
CAACGAACCC ATCGAAATTA CGAAGCACGT TTAGAGGCAA AAAAACTCTT AATACAATTA
TTACTGCAAC GCCAGTGGGA GCAGGAACGC ATTGAGCAAC TCATTCGTGT TATTGATTGG
TTTTTAAGCT TACCCAAAGA GTTACGGCAA AAATTAAAAA CAGAAATCTA CCAAATGGAG
GAGGAGCAAA AAATGAAATA CATTACAAGT TTTGAACGCG ATGCCAAAGA AGAAGGCATT
TTAGAAGGCA GAGAGATTGG GGTGCTTGAA GGAATGGAGA ACGGTAAGTT GGAAGTTGCA
ATGCGTTTAT TGGGAATTGG AATGAGCGTT GAGCAAGTAG CTGAGCTTAC AGGAGTTACC
GCAAATGTGC TAACGGCTAA ATTAAAAAGT TGA
|
|---|
| Protein sequence | MANMQLPPNQ RDNYDSPWKE AIEHYFPEFM AFYFPNAHKA IDWAKGYHIL NEELRSLIPD
AEISNRVVDK LVQVHLLDGN ESWLYIHIEV QSFWEADFPK RVFIYFYRIF DKYGKAVANF
VVLADMNPHW LPTSYNMETI GSKLTLDFSV VKLLDFEPHM QELLASNNVF GLITAAHLLT
QRTHRNYEAR LEAKKLLIQL LLQRQWEQER IEQLIRVIDW FLSLPKELRQ KLKTEIYQME
EEQKMKYITS FERDAKEEGI LEGREIGVLE GMENGKLEVA MRLLGIGMSV EQVAELTGVT
ANVLTAKLKS
|
|---|
| |