Gene Cag_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1080 
Symbol 
ID3746734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1461357 
End bp1462874 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content31% 
IMG OID637773611 
Producthypothetical protein 
Protein accessionYP_379385 
Protein GI78189047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0178901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGC TACCCGTAGG CATACAAACA TTCAGCAAAA TAATTGAGGA TGATTATTTG 
TACATTGATA AAACAGATAT AGCGAAAAAT ATGATAGAAA AATATCAATA TGTTTTTCTA
TCACGTCCAC GCCGCTTTGG TAAAAGCCTA TTTCTCGATA CACTTCAAAA TATTTTTGAA
GGTAAACAAG AGCTTTTTAA AAACTTACTT ATTTACAACC AATGGAATTG GAGTAGAACC
TATCCCGTTA TTAAAATAAG TTTTAGTGGA GGCATACGCG ATAAAGAAAG TCTGCATAAA
AATCTTTTCT ATATCTTAAA AGATAATCAA GAACGACTCA ATATTACTTG TGAAGAAAAA
AATGATCCAA ATCAATGCTT TGCTGAATTA ATTAAAAAAA CATTTCAAAC ATATCAAAAA
AGCGTTGTTA TTCTGATTGA TGAGTACGAT AAACCAATTC TTGATAATAT TGAAAATATT
GCGGAAGCGC TCATCATTCG TGATGGAATA CGAGACTTTT ATACCAAAAT AAAAGAGAGT
GATCAATATT TGCGTTTTGT TTTTCTTACA GGTGTTAGCA AATTTTCAAA AGTATCGCTT
TTTAGTGGTT TAAATAATCT TGAAGATATT AGCCTCAATC CCGATTTTGG TAACATTTGT
GGCTATACAC AACATGATGT GGATACCTCT TTTGCGCCAT ATCTTGAAGG TGTTGATATG
GAAGCGGTAA AACGCTGGTA TAACGGCTAT AACTTTCTTG GCGATAAAGT CTATAACCCA
TTTGATATTC TACTCTTTAT CAAAAACCAT AAGATGTTTA AAAACTATTG GTTTGAGACA
GGAACACCAA AATTTTTGAT TGACCTCATT AAAAAGAACC AATATTTTGT TCCTGAATTT
AATGGCTTAA AAGCCGATGA ATCCTTGATT AATAGTTTTG ATATTGAAAA ACTCACATTG
GAAACACTTT TATTTCAAAC AGGCTATTTA ACCATTAAGC AATTATTGCT CTCAGATGTA
GGTGTTAGTT ATGAATTAGG ATTTCCTAAC AAAGAGATAC AGATAAGTTT TAATAATTAT
ATTTTGCAAT CCATAACGCA AAATTCACAA AAAGAATCAA TTCGTCATGA ATTACTTGCA
ATTGTTAAAG CTGGAGATAT TGGTAATTTA GAACAAATTA TCAAACGACT TTTTGCAAGC
ATTGCGTATA ATAATTTCAC CAACAATTAT ATTGAAAGTT ATGAAGGTTT TTATGCTAGT
GTACTTTATG CTTATTTTGC AAGTCTTGGG TTTGACATCA TAGCTGAAGA TATCACCAAT
AAAGGACGGA TTGATTTAAC ACTGAGAAGC CTTGACAAAA CCTATATATT TGAATTCAAA
GTTATTGCAG AAGAGCCACT TGAGCAAATC AAGAAAATGA AATATTATGA AAAATATAAT
GGTGAACGTT ATCTTATTGG TATTGTCTTT GATCCAAAAG AGCGAAACGT TAGTCAGTTT
GCATGGGAAA AAATTTAA
 
Protein sequence
MKPLPVGIQT FSKIIEDDYL YIDKTDIAKN MIEKYQYVFL SRPRRFGKSL FLDTLQNIFE 
GKQELFKNLL IYNQWNWSRT YPVIKISFSG GIRDKESLHK NLFYILKDNQ ERLNITCEEK
NDPNQCFAEL IKKTFQTYQK SVVILIDEYD KPILDNIENI AEALIIRDGI RDFYTKIKES
DQYLRFVFLT GVSKFSKVSL FSGLNNLEDI SLNPDFGNIC GYTQHDVDTS FAPYLEGVDM
EAVKRWYNGY NFLGDKVYNP FDILLFIKNH KMFKNYWFET GTPKFLIDLI KKNQYFVPEF
NGLKADESLI NSFDIEKLTL ETLLFQTGYL TIKQLLLSDV GVSYELGFPN KEIQISFNNY
ILQSITQNSQ KESIRHELLA IVKAGDIGNL EQIIKRLFAS IAYNNFTNNY IESYEGFYAS
VLYAYFASLG FDIIAEDITN KGRIDLTLRS LDKTYIFEFK VIAEEPLEQI KKMKYYEKYN
GERYLIGIVF DPKERNVSQF AWEKI