| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0974 |
|---|
| Symbol | |
|---|
| ID | 3746899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1312996 |
|---|
| End bp | 1313682 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637773504 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379280 |
|---|
| Protein GI | 78188942 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTAC GTCCAGTCCA CGAAAAAATT AATGATTTAT CGGAAGGCTT AGTTCAGCTT
TCTGATAAGG TTGTTGGAAA TTTGGTGAAA GCTCTTCAAA CCGTTCGCAA TCAAGATGAG
CAAGAGGCGC ACCAAATTCG CAAAAGCGAT CATGAAATTG ATTGTGCTGA GGTTGATTTA
GAGGAGCGCT GCCTTGCTTT TCTTGCCCTT CAGCAACCCG TTGCAGGCGA TTTGCGTACC
ATTGTAACCA TTATTAAAAT TAATGATGAT CTTGAACGCA TTGGCGATTT AGCGGTTCAC
GTTGTTGACC GTATGCCGGA AATTAACCCA GCGTTACTTG ATATGTTTGC TTTTGAGCGT
ATGGGTTTTC AGGCGGCTGA TATGGTAAAA AAATCTATTG ATGCGTTTGT TTTAAAGGAT
AAAGTGCTGG CAGACAATGT GTGTGCGCTT GATGAAGAGA TTGATGTAAT GCACCGTGCA
GTCTTTAAAA AAGTTGCTGC TTTAATGAAA AGTCCCGATT CGGATGTGGA TCAACTTATT
GCAGCACTCA GCATTTCGCG CTACCTTGAG CGTATGGCTG ACCACGCATC GCGCATTGCA
CACGAGGTAA TTTTTCTTGC AACGGGCGAA ATTGTTCGCC ACAAATCAAA AGCTTACGAA
AAGCTTGTGG AGTCGCTAAA GAATTAG
|
|---|
| Protein sequence | MSLRPVHEKI NDLSEGLVQL SDKVVGNLVK ALQTVRNQDE QEAHQIRKSD HEIDCAEVDL
EERCLAFLAL QQPVAGDLRT IVTIIKINDD LERIGDLAVH VVDRMPEINP ALLDMFAFER
MGFQAADMVK KSIDAFVLKD KVLADNVCAL DEEIDVMHRA VFKKVAALMK SPDSDVDQLI
AALSISRYLE RMADHASRIA HEVIFLATGE IVRHKSKAYE KLVESLKN
|
|---|
| |