| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0959 |
|---|
| Symbol | |
|---|
| ID | 3746534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1296538 |
|---|
| End bp | 1298823 |
|---|
| Gene Length | 2286 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637773489 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_379265 |
|---|
| Protein GI | 78188927 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG AAACTTACAG CGTTAAAGGA ATGCACTGTG CAAGTTGCGC AGCCATTATT
GAAAAAAAGC TCTCTAAAGT AGATGGCATT AGTAAAGCCA GCGTTAATCT TGCTACCGAA
ACCGCCCAGC TTTCTTTTGA TAAGGAAAGC CTCAGCACCG AAGCGCTTAA CAATATTTTG
AACAACTATG GTTTTTCGTT AGAACGCGAA ACCGCACCTG AAGAGAGCCG CACCAATCCT
ACCGTAAAGC TGCAAGCAAA GCAAGCCGCT AAAGTAGAAG AGTTACGCCA ACAACGCCAA
AACGTTCAAC GAACTCTGCC GCTTGCTCTG CTTCTTTTTT TCTGGATGGT GTGGGAAAGT
GCCGCCATGA GCCTGCACTT CATTCCCCAC CCTCCACTTC TCATGCACCA GTTTACCCTG
CCGCTTTTGG TAGCAGCAAC GTGGGTGCTC TTGACGGTTG GCAAACCTTT TTTGCGTGCC
ATTCCAAGCT TTATCCGAAA CGGTGCGGCT AACATGGATA CGCTGATTGG CATTGGCACA
CTCTGCGCCT ACCTCTACAG CGCAACCATC ACGTTGCTGC CACAAGCAAA AAGCTTTTTG
CACGCATCGG AGGCAACCTA TTTTGATGTA ACCATTGTAG TTATTGGCTT TGTGCTGCTT
GGCAAATACC TTGAAGCACG CTCAAAAATG AAAACAGGTG AGGCGCTTGA AGCTCTTATT
ACGCTGCAAG CTAAAAGCGC TTTAGTTGAA CGAGATGGTA TTACTGTTGA AATTCCTATT
GGTCAGGTTC GACGTGGTGA TACCATTATG GTGCGTCCGG GTGAAAAAAT CCCCGTTGAT
GGCATTATTA CTGATGGCAC TTCAGCGGTT GATGAGGCAA TGGTTACGGG TGAATCGCTT
CCCGTTGATA AAAAGGCGGG TGACGGGGTT ATTGGTGGAA CCATGAATAA ACAAGGTTCC
CTTACCTTTA TTGCCGCTAA AGTTGGAAGC GATACCATGC TTGCCCGCAT TATTCGTATG
GTGGAAGATG CGCAAAGCTC CAAAGCTCCT ATTCAGCAAC TTGCCGATAA AGCTGCCGCT
ATTTTTGTTC CAACCGTCCT TATTTTAGCA GCATTGACCT GTATTCTGTG GCTAACACTT
GGCACCCTTT GGCTCGGTTT TTCAACGGCT CTTTCCTACG CCATTATGGG CACGGTTGGT
ATTTTAGTGG TTGCCTGCCC CTGCGCTTTA GGGCTTGCAA CGCCTACAGC TATAATTGTT
GGAATTGGCA AAGGTGCTGC CGAGGGGATT CTTATTCGCA ACGCCGAAAG CCTTGAAAAA
CTCAGCCGTG TAAACACCGT TGTGTTCGAT AAAACCGGCA CCATTACGAG CGGAAAACCT
TCGCTGCACG CCGTTGTGCC ATTTGATGGC AAAAGCACAT CCAATACATT ACTTACTCTT
GCCGCTATGC TTGAAAGTCG TTCAGAGCAT CCATTAGCTC AAGCGATTGT TGAAGCTGCA
CGCCTACAGC AAATTGCTTT CGGTGAGGTA ACAAATTTTA GCGCACAAGA AGGAGTTGGG
GTTACAGGAA TGGTGGATGG GCGAGCGATT ACCATCCGTA AGCCGCAACA AAACGAAGAG
CATGGGCGAG AAGCCATTGA GGCACTTCAA GCTGAAGGTA AAAGCATTGT CGTTATGGAA
GAAAATGGAG TTGCGCTTGG CGTGCTTGCG CTCAGCGATA CCATCAAGCC CGAAGCCGCA
AGCGCTGTAG CTACATTAAA ACACAAAGGC ATTCGCGTAC TAATGTTAAG CGGCGATCAC
CAAGCGGCAG CAAACGCTGT TGCCGCTCAA GCGGGCATTG ATGAAGTGAT AGCCGACGTG
TTACCGCACG ATAAAGCAAA TAAAGTGATG GAGCTACAAG CCAAAGGAGC CATTGTAGCA
ATGGTTGGCG ACGGCATTAA CGATGCACCG GCTCTTGCCC AAGCCGATGT TGGCATCGCC
ATGGCGACTG GTACCGACGT AGCTATGGAA ACCGCTGGCA TCACATTATT AAAAGGCGAC
ATCAATAAAA TACCACAAGC CTTAAACCTT GCACACGCTA CCATGCGCGT TATTCGTCAA
AACCTCTTTT GGGCATTTTT TTATAACATC ATCTGCATTC CATTAGCCGC CGGAGCATTT
TATCCAATCT GGGGTATTTT ACTGAATCCC GCTTTTGCAG GATTAGCGAT GGCTGGCAGT
AGTGTGTCGG TGGTAAGCAA CTCTTTACGG CTGAAACGGA TACAAGTAAA AGAAAAACAA
AATTAA
|
|---|
| Protein sequence | MSTETYSVKG MHCASCAAII EKKLSKVDGI SKASVNLATE TAQLSFDKES LSTEALNNIL
NNYGFSLERE TAPEESRTNP TVKLQAKQAA KVEELRQQRQ NVQRTLPLAL LLFFWMVWES
AAMSLHFIPH PPLLMHQFTL PLLVAATWVL LTVGKPFLRA IPSFIRNGAA NMDTLIGIGT
LCAYLYSATI TLLPQAKSFL HASEATYFDV TIVVIGFVLL GKYLEARSKM KTGEALEALI
TLQAKSALVE RDGITVEIPI GQVRRGDTIM VRPGEKIPVD GIITDGTSAV DEAMVTGESL
PVDKKAGDGV IGGTMNKQGS LTFIAAKVGS DTMLARIIRM VEDAQSSKAP IQQLADKAAA
IFVPTVLILA ALTCILWLTL GTLWLGFSTA LSYAIMGTVG ILVVACPCAL GLATPTAIIV
GIGKGAAEGI LIRNAESLEK LSRVNTVVFD KTGTITSGKP SLHAVVPFDG KSTSNTLLTL
AAMLESRSEH PLAQAIVEAA RLQQIAFGEV TNFSAQEGVG VTGMVDGRAI TIRKPQQNEE
HGREAIEALQ AEGKSIVVME ENGVALGVLA LSDTIKPEAA SAVATLKHKG IRVLMLSGDH
QAAANAVAAQ AGIDEVIADV LPHDKANKVM ELQAKGAIVA MVGDGINDAP ALAQADVGIA
MATGTDVAME TAGITLLKGD INKIPQALNL AHATMRVIRQ NLFWAFFYNI ICIPLAAGAF
YPIWGILLNP AFAGLAMAGS SVSVVSNSLR LKRIQVKEKQ N
|
|---|
| |