Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0946 |
Symbol | |
ID | 3747099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1281788 |
End bp | 1283380 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637773476 |
Product | peptide chain release factor 3 |
Protein accession | YP_379252 |
Protein GI | 78188914 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAC AAAAAGAAAC TGCCCGCCGA CGCACCTTTG CCATTATTAG CCACCCCGAC GCAGGCAAAA CCACGCTTAC CGAAAAATTT TTGCTTTTTG GTGGCGCTAT ACAAACCGCA GGTGCGGTAA AAAGCAATAA AATCCGTAAA ACCGCCACCA GCGACTTTAT GGAAATTGAA AAGCAACGCG GTATTTCGGT AGCCACTTCG GTGATGGGCT TTGAATATGG TGGCAAGCGT GTCAATATTC TCGATACACC GGGTCATAAA GATTTTGCGG AAGATACCTA TCGCACCTTA ACCGCAGTTG ATAGCGTTAT TCTTGTGGTG GATTGTGTAA AGGGCGTTGA AGAGCAAACC GAGCGCTTAA TGGAGGTGTG CCGAATGCGC AACACGCCCG TTATTATTTT TATTAATAAG CTGGATCGTG AAGGCAGAAA TCCCTTTGAA TTGCTTGACG AATTGGAACA CAAGCTACAA ATTCATGTTC GCCCATTGAC ATGGCCTATT AGCCAAGGGC AAACCTTTAA AGGCGTGTAT AACCTTTATA AGCAAGAACT TAACCTCTTT GAGGCAAACG CCACACGCAT TACTGAAAGC TACGTAAAAG TAAACGGGCT TGATGATCCA GCATTAGACC AATGGGTTAC AAGCAGCTTT GCCGCAAAGC TCCGTGAAGA TATTGAACTG ATTGAGGGCG TGTATGAACC GTTTAGTGAA GAATATTACC GTGAGGGTGA GCTTGCGCCC GTCTTTTTTG GCAGTGCTAT CAACAACTTT GGCATTCGCG AATTGCTTGA AACCTTTCTT ACCATTGCCC CCTACCCCCA TGAACGCGAA GCTACCGAGC GCGTTATTGT GGCTACCGAA CCAACCATGA CGGGCTTTGT CTTTAAAATT CACGCCAATC TTGACCCCAA CCACCGCGAC CGCACCGCCT TTTTCCGCAT TTGCTCAGGC ACTTTTGAGC GCAATAAATT TTACCATCAT CCCCGTTTGC AAAAAAAGCT GCGCTTTTCA AGCCCAACGC AATTTATGGC AAACGAAAAA AACGTGATTG ATGAAGCCTT CCCGGGCGAT GTTATTGGCT TGTACGATAA CGGCTCATTA AAAATTGGCG ACTCACTCAC CGAAGGCGAA GAGCTCCATT TTCACGGCAT TCCAAGCTTT TCACCCGAAA TTTTTAAATC GCTTGAAAAT CGCGATCCAC TCAAAGCCAA GCAGCTCGAT AAAGGCATTC GCCAACTTAC CGAAGAGGGC GTTGCACAGC TTTTTATTCA ATATGGTAGC CGCAAAATTA TTGGCACCGT CGGCGAACTA CAATTTGACG TTATCAAATT CCGCCTTGAG CACGAGTACG GCGCTCAGTG CGACTTTACT CCTTTGCGTT ACCACAAAGC TTATTGGGTT ACCAGCAGCA ACAAAGAGAT GCTTGAAGAA TTTCTCCGCC GTAAATCGAA TGCTATGGCA TTTGATAAGG AGGAACATCC CGTTTTTTTA GCTGAAAGCG AATGGATGAT AAAAGTTGCA CGCGAAGATT ATCCCGATCT TGAATTTCAC ACAACATCGG AGTTTAAGAC CATGCAAGGG TGA
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Protein sequence | MDLQKETARR RTFAIISHPD AGKTTLTEKF LLFGGAIQTA GAVKSNKIRK TATSDFMEIE KQRGISVATS VMGFEYGGKR VNILDTPGHK DFAEDTYRTL TAVDSVILVV DCVKGVEEQT ERLMEVCRMR NTPVIIFINK LDREGRNPFE LLDELEHKLQ IHVRPLTWPI SQGQTFKGVY NLYKQELNLF EANATRITES YVKVNGLDDP ALDQWVTSSF AAKLREDIEL IEGVYEPFSE EYYREGELAP VFFGSAINNF GIRELLETFL TIAPYPHERE ATERVIVATE PTMTGFVFKI HANLDPNHRD RTAFFRICSG TFERNKFYHH PRLQKKLRFS SPTQFMANEK NVIDEAFPGD VIGLYDNGSL KIGDSLTEGE ELHFHGIPSF SPEIFKSLEN RDPLKAKQLD KGIRQLTEEG VAQLFIQYGS RKIIGTVGEL QFDVIKFRLE HEYGAQCDFT PLRYHKAYWV TSSNKEMLEE FLRRKSNAMA FDKEEHPVFL AESEWMIKVA REDYPDLEFH TTSEFKTMQG
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