| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0847 |
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| Symbol | |
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| ID | 3746806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1177760 |
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| End bp | 1179976 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637773376 |
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| Product | helicase RecD/TraA |
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| Protein accession | YP_379155 |
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| Protein GI | 78188817 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTC AGGATGGGCA AGAATCCTAC TATTATTCCC CCAAAGAGCG ACTAAGTGGC
GCGGTTGAAA GGGTAACCTT TCATAGCCAA AAAAATGGCT TTTCAGTTCT CCGCATTAAA
GTAAAAGGGC GTCGTGATTT AGTAACCGTT GTTGGTGCGA CGCCCTCCAT TGCGCCGGGT
GAATTTGTGG AGTGCCTTGG AGAGTGGCAC AACGATTCTA CCTATGGTTT GCAATTCCGC
GCAACTGAGC TTACCGTTGT TCCCCCCGAA ACCATTGATG GCATTGAAAA ATACCTTGCT
TCGGGCATGG TAAAAGGTAT TGGTCCGCAC TTTGCAAAAA CCTTAGTGTA TGCCTTTCGC
GAAGATGTAT TTACCGTTAT AGAAGAGGAG CCTGAGCGCT TGCTTGAGTT GCCCGGCATT
GGGCAAAAGC GCATGGAAAT GGTAACAAGC GCATGGGCTG ACCAAAAGGT AATTCGCGAT
ATCATGGTCT TTTTGCAATC ACACGGTTTA GGCACAAGCC GTGCGGTGCG CATTTTTAAA
ACCTACGGTA ACGAGTCAAT TTTGCGGGTT AAGGAGAATC CTTACCGCTT AGTGCTTGAT
ATTTATGGCG TGGGTTTTAA AACGGCTGAT GCTCTTGCTA TGCAGCTTGG CATTGCCCCC
GATTCGCTGA TTCGTGCGCA AGCGGGCGTA CACCATGTGT TGCAGGAAAT TGCCTCATCG
GGGCATTGTG CGGCACCTCG TGAACAGCTT GTGGCTGAAG CGTCTCGCTT ACTTAGCATC
CCCGAAGAGC GTACTCACGA GGCAATTGAT GCTGAATTGC GAGCAGGCAA CTTAGTGCGC
GAAGAGCTGC GAGGCGTGGA AACACTCTAC TTGCTTTCGC TCCACCGTGC CGAACTTGGT
GTAGCAACCT CCTTAATGCG CTTGCTTGAG GGCGAAATTC CCTGGAGGCA CTTAGCCATT
GAGGAGGCGC TGCCGTGGGT TGAAGCACAA AACAATATCA CCCTTTCACC CTCCCAAAAA
GAGGCGCTCC ATACAGCACT TACCAACAAA GTAACTGTTA TTACGGGCGG ACCAGGTGTG
GGTAAAACCA CCTTAGTAAA AAGCATTCTG CTCATTTTGC AAGCCCAAAA AGTGCGTGTG
GCACTTTGCG CTCCTACAGG ACGTGCAGCA AAACGCCTCT CAGAATCCAC AGGACTTGAA
GCAAAAACCA TCCACCGCTT GCTGGAATTT GATCCCCTAA CGGGTGGCTT TAAACATCAA
CGCGATAATC CCTTAGAGTG CGATTTAGTA GTGGTTGACG AAAGCTCGAT GGTTGACGTA
GTGCTTATGA ACCGCTTGCT TGCCGCTGTG CCCGAAAAAG CCGCTCTTCT GCTGATTGGC
GATGTTGACC AGCTACCATC GGTAGGAGCA GGCGCCGTGC TTGCCGATAT TATCCGCTCC
GAAACCATTC CCACCATTCG CTTAACCGAA ATTTTTCGCC AAGCCGCTTC GTCGCGCATT
ATTATGAATG CCCACCGCAT TAATAAGGGT GAACTGCCAT TACGCGATGA AAGCAACACG
TTAAGCGACT TTTACCTCAT TGCAGCAAAC ACTCCCGAAG AAATTTATAA TCGCTTGCTT
ACCGTTATTA CCGAGCGCAT TCCTGCCCGC TTTGGGCTTC ACCCCGTGCG CGACGTGCAA
GTGCTTACCC CCATGAATCG TGGAGGACTT GGCGCACGAG CGCTTAATGT GGAGCTGCAA
AAAGTGCTAA ATGGGCAGGT AGAACCCTCC GTAACGCGCT TTGGCACTCG CTACGCCGCA
GGCGATAAGG TGATTCAAAT GGTCAACAAT TACGATAAAG AGGTCTTTAA TGGCGATATT
GGGCACATTA GCGCCGTTGA GCGCGAAGAT GGCGCGGTGT TAGTTGACTT TGATGGAACA
CTCGTAAGCT ATGAATTTGG GGAACTTGAT GAGCTATCGC TTGCCTATGC AACCAGCATT
CACAAAAGCC AAGGCTCCGA ATATCCCGCA GTGGTAATTC CCCTTGCCAT GCAACATTAC
AACCTTTTAG AACGCAACCT TATTTACACC GCCGTTACAC GAGGCAAAAA GTTAGTGGTA
ATTATTGGCG AAACCCGCGC GCTTGCCATG GCAGTTAAAA ACCACAAAGC TATGCGCCGC
CTTACAGGAT TAGCAGAACG CCTTTCCGCC CTTGCTCGTT ACGAAGCAAA CTTGTAG
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| Protein sequence | MSVQDGQESY YYSPKERLSG AVERVTFHSQ KNGFSVLRIK VKGRRDLVTV VGATPSIAPG
EFVECLGEWH NDSTYGLQFR ATELTVVPPE TIDGIEKYLA SGMVKGIGPH FAKTLVYAFR
EDVFTVIEEE PERLLELPGI GQKRMEMVTS AWADQKVIRD IMVFLQSHGL GTSRAVRIFK
TYGNESILRV KENPYRLVLD IYGVGFKTAD ALAMQLGIAP DSLIRAQAGV HHVLQEIASS
GHCAAPREQL VAEASRLLSI PEERTHEAID AELRAGNLVR EELRGVETLY LLSLHRAELG
VATSLMRLLE GEIPWRHLAI EEALPWVEAQ NNITLSPSQK EALHTALTNK VTVITGGPGV
GKTTLVKSIL LILQAQKVRV ALCAPTGRAA KRLSESTGLE AKTIHRLLEF DPLTGGFKHQ
RDNPLECDLV VVDESSMVDV VLMNRLLAAV PEKAALLLIG DVDQLPSVGA GAVLADIIRS
ETIPTIRLTE IFRQAASSRI IMNAHRINKG ELPLRDESNT LSDFYLIAAN TPEEIYNRLL
TVITERIPAR FGLHPVRDVQ VLTPMNRGGL GARALNVELQ KVLNGQVEPS VTRFGTRYAA
GDKVIQMVNN YDKEVFNGDI GHISAVERED GAVLVDFDGT LVSYEFGELD ELSLAYATSI
HKSQGSEYPA VVIPLAMQHY NLLERNLIYT AVTRGKKLVV IIGETRALAM AVKNHKAMRR
LTGLAERLSA LARYEANL
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