| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0743 |
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| Symbol | |
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| ID | 3746492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1049137 |
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| End bp | 1050306 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637773275 |
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| Product | metalloprotease secretion protein |
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| Protein accession | YP_379055 |
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| Protein GI | 78188717 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.554659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAA AAATTACATC ACCGCTCGAT AAGGGTGCCG CAAATGCGCC TGACGCTAAA
AAATATCGCG ATACGCGCTC TCCCATTCGT CTTGGTATTT GGATTTTGTT GGTGGGATTT
GGCAGCTTTT TACTATGGGC ATCCTTTGCG CCGCTTGACG AAGGCGTGCC TTGCCAAGGG
TTAGTAGGTA TTGCTACCAA GCGCAAAGTG GTTGAGCATT TACGGGGTGG TACGGTGCAA
GCCGTGCATG TGCGTGAAGG CGAAATAGTG CAAGAGGGGC AGGTGCTGAT TTCGCTTGAT
AGCCAAACAG CGCGTGCTCG TTTTGATGAA ATTCATCAGC ACTATATTGG AATGCGAGCA
ACGGCTGACC GCTTGCAATC CGAAATGCGT GGAGCTGGTT CTATTGCATT TCATCCCGAT
CTTTTACGCG AATCCGATAA ATCCTTAGTT CGCAAAAATA TTGAAAATCA AAAAGCGCTC
TTTGCTTCTC GTCGCCAAAC CTTGCAAATT CTTACCGAGC AGCTTATCGC TATTAAATCG
CTTGTAAGTG AAGGTTTTGC GCCGCTTAGC CAACAACGCG ATCTTGAGCT TAAAATTGCT
GAGTTTAAAA GCAGCACTGC TTCGCAACTT GCGCAAGTGC AGCTTGAAGT TGAAGCTGAT
GCCGAAAAAA GCCGTGCCCT TGCTGCCGAG CTTGCTGATA CCGAAATTCG CTCTCCAGCT
TCAGGGCAGG TGGTTGGCTT GCAGGTGCAA ACGGTAGGTG CGGTCATTCA GCCCGGTCAG
AAAATTATGG ATATTGTGCC GTTAGATGAA AGTTTGCTGA TTGATGCGAA AATTGCTCCA
CATTTGATTG ATAGTGTTCA TCAAGGATTG GCTGTGGATA TTAATTTTTC AGCTTTTGCT
CATGCGCCAC AGCTTGTGGT GGAGGGAAAT GTTGAGTCGG TTTCTAAGGA TATTGTTACC
GATCCACCCT CAAGTGGCAC GCAGCCCGGA GCGTCATATT ACCTTGCACG AATTGCGGTA
ACCAAGGAAG GATTAAAGCA GCTTGGTAAG CGCGAAATGC AGCCTGGTAT GCCAGCAACG
GTTGTTATTA AAACAGGTGA ACGCTCCCTT TTAACCTACT TACTTGATCC GCTGATGAAG
CGTATTCATG TTTCCATGAA AGAGGAGTAA
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| Protein sequence | MAEKITSPLD KGAANAPDAK KYRDTRSPIR LGIWILLVGF GSFLLWASFA PLDEGVPCQG
LVGIATKRKV VEHLRGGTVQ AVHVREGEIV QEGQVLISLD SQTARARFDE IHQHYIGMRA
TADRLQSEMR GAGSIAFHPD LLRESDKSLV RKNIENQKAL FASRRQTLQI LTEQLIAIKS
LVSEGFAPLS QQRDLELKIA EFKSSTASQL AQVQLEVEAD AEKSRALAAE LADTEIRSPA
SGQVVGLQVQ TVGAVIQPGQ KIMDIVPLDE SLLIDAKIAP HLIDSVHQGL AVDINFSAFA
HAPQLVVEGN VESVSKDIVT DPPSSGTQPG ASYYLARIAV TKEGLKQLGK REMQPGMPAT
VVIKTGERSL LTYLLDPLMK RIHVSMKEE
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