| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0740 |
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| Symbol | |
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| ID | 3746491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1045452 |
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| End bp | 1047215 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637773274 |
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| Product | Type I secretion system ATPase, PrtD |
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| Protein accession | YP_379054 |
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| Protein GI | 78188716 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0285827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAC CTGAAGTTAA ATCACCTTTG CGTGAGGCGC TGTGGGCGCA ACTGCCTGCA
TTACTCAAGA CCTTTTATTT TAGTATTGTG GTGAATGTCT TGGTGTTAGC ACCCAGCGTT
TATATGATGG AGGTGTATGA CCGTGTGGTT AATAGCCGCA GCCACAATAC GCTGTTGATG
CTCACCTTGT TGGTGGTTGG TGCCTACCTT TTGCTTGAAG CGCTGGAGTG GGTGCGCCGC
CAAATTATGC AGTCAGCCGC ATTGCAGCTT GATGGCAAAC TGCGCGAAGA GGTTTTTAGT
GCTATTTTTG CTGCTCGCCT TCAAAATATC CCCTCAGCCG GTGCGCAAGC CTTGCGTGAT
CTTAAATCTA TCCGCGAATT TCTCCCTTCT CAAGCATTGC TTGCAATGGT TGATACCCCG
TTAGCATTGT TGGTGCTTAT TTTGCTTTTT CTCATGGCTC CCTTATTTGG TTGGTTTTCG
GTTGCTGGTG CAGTGGTTCA GTTTGGCATT GGCTTTTTTA ATGAGCGTCG TATTCGCAAG
CCATTGCAAG AGGCTAATCG TAGTGCTATG GTTGCACAAG GGTATGCTGA TGGTGTAATT
CGTAATGCGC AGGTGATTGA GTCTATGGGG ATGTTGCCGC ACATTCATCG TCGGTGGATG
GAGCGTCAGC AGGAGTTTTT AGTAAACCAA GCTACCGCTT CTGACCATGC GGGCACCAAT
GCTGCTCTTT CAAAATTGTT GCAAAGTTTG CTGAGTTCGC TGTTGCTTGG GGTTGGTTGT
TGGCTTACGC TTAAGGGTGA AGTGTTTGGT TCTGCTATGA TTGTTGCTTC TATTCTTGGC
GGTAGGGTGT TAGCTCCACT GGTACAAATT ATTGGTAGTT GGCGGCAGGT TGAAGGGGTG
ATGGAGGCGT ATCATCGTCT CGAAGCAATG TTGCGCGAAC TGCCTATGCC GCAAAAAGGA
ATGCCGCTAC CAGCTCCAAC GGGTCAGTTA TCAGTGGAGG GAATTATTGC GGGAGCGCCT
CGTAGCCCTA TGCCTATTTT AAAAGGTGTC AGTTTTCGTG TTATGCCTGG TGGCACGTTG
GCGGTTGTTG GACCATCTGC TTCGGGTAAA ACCACACTTG CGCGTTTGTT GGTTGGTATT
TGGCCTTCAA CGCAAGGTAA GGTTCGTCTT GATGGGCAGG ATATTTATTT GTGGGATAAG
GAAGAGCTTG GGCGCTATGT TGGTTATCTT CCACAAAATG TAGAGTTGTT TGAAGGCACC
ATTGCCGAAA ATATTGCTCG TTTTGGAGAA CCTGAGCTTG AAAAAGTGGA GGCGGCTTGC
CGTCTTGTTG GGCTTGATGC CTTAATGGTA AATTGGCCAA AAGGGTACGA TACCCAAATT
GGTGAGGATG GGGCTTTTCT TTCGGGTGGT GAGCGTCAGC GGGTGGCGTT AGCTCGTGCT
GTGTATGATA TGCCAAAGCT TGTGGTGCTT GATGAGCCTA ACGCAAGCCT TGATGAGGCG
GGCGATGCAG CGCTTATTAA CACGGTGAAA AAGCTTCGTG AAAATGGCAC AACCGTTATT
GTGATGACGC ACCGCTTAAA TATTCTTGCG GCTATTGAAT ACATGCTTGT GTTAGTGGAT
GGTCAGGTGC AGAAGTTTGG AACGGTAAAG GAAGTTATGG AGGCATTACA AAATCCTCAG
CAAGCGGGAG GTGCTCAGCA ACAGCCTCAA CCAAAGCCAG CACCGCAACC GAAACCTATG
CCATCAACAC CTCGTTTAGC ATAA
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| Protein sequence | MKKPEVKSPL REALWAQLPA LLKTFYFSIV VNVLVLAPSV YMMEVYDRVV NSRSHNTLLM
LTLLVVGAYL LLEALEWVRR QIMQSAALQL DGKLREEVFS AIFAARLQNI PSAGAQALRD
LKSIREFLPS QALLAMVDTP LALLVLILLF LMAPLFGWFS VAGAVVQFGI GFFNERRIRK
PLQEANRSAM VAQGYADGVI RNAQVIESMG MLPHIHRRWM ERQQEFLVNQ ATASDHAGTN
AALSKLLQSL LSSLLLGVGC WLTLKGEVFG SAMIVASILG GRVLAPLVQI IGSWRQVEGV
MEAYHRLEAM LRELPMPQKG MPLPAPTGQL SVEGIIAGAP RSPMPILKGV SFRVMPGGTL
AVVGPSASGK TTLARLLVGI WPSTQGKVRL DGQDIYLWDK EELGRYVGYL PQNVELFEGT
IAENIARFGE PELEKVEAAC RLVGLDALMV NWPKGYDTQI GEDGAFLSGG ERQRVALARA
VYDMPKLVVL DEPNASLDEA GDAALINTVK KLRENGTTVI VMTHRLNILA AIEYMLVLVD
GQVQKFGTVK EVMEALQNPQ QAGGAQQQPQ PKPAPQPKPM PSTPRLA
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