| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0572 |
|---|
| Symbol | |
|---|
| ID | 3747519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 678292 |
|---|
| End bp | 679383 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637773106 |
|---|
| Product | GTP-dependent nucleic acid-binding protein EngD |
|---|
| Protein accession | YP_378888 |
|---|
| Protein GI | 78188550 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTCC GCTGCGGTAT TGTTGGTTTG CCCAATGTGG GCAAGTCAAC CCTTTTTAAC
GCTATTACAG CGAAGCAAGC TGAAGCTGCT AACTACCCTT TTTGCACCAT TGAACCTAAC
GTTGGCACGG TGCTTGTGCC CGATGAACGA ATGCAGCAAA TTGCTAATGT TGTAAAAACT
CCAACTTTAG TACCTGCTGT GCTGGAGATT GTAGATATTG CTGGTTTGGT AAAAGGTGCC
AGTAAGGGCG AAGGGCTTGG CAACCAATTT CTGTCGCACA TTCGCGAGGT GGATGCTATT
GTGCATGTAG TGCGCTGTTT TGAGGATGAA AATATTATCC ACGTACAAGG CAAAATTGAT
CCAGTTGATG ACATTGCCAC CATTGAAACC GAGTTGATGC TTGCTGATCT CGATAGCATG
GAGCGCCGTA TGGATCGTTT GCGCAAAAAT GTACGAAAGG AGAAAGAGCT TCAGCAACAA
GTTGATGTGG CTGAAAAAAT TATAGCGGCT TTAAGTGAAG GCACTCCTGT GCGCAAAATT
CTTGAAACGC CCGAAGAGCA GCAAATTGCA AAACAATTCT TCCTTATTTC TTCAAAACCA
ATTCTTTTTG CGGCAAACGT TGCTGAGGGT GATTTACCCA ACGGCAATGC ACACACCGCC
AAAGTGGCTG AAATTGCGGC TGAGCATGGT GCAAAAATGA TCATCATCAG CGCTAAAACT
GAAGCTGAAA TTGCCGAACT GCCCGAAGAA GAGCGTCCAG AATTTCTTGA AAGTCTTGGT
TTACATAGTT CAGGACTTGA TCGCTTAATT CAATCAGCTC ACGATTTACT TGGCTTGCAA
ACCTATTTTA CGGCAGGAGA AAAAGAGGTT CATGCGTGGA CTATTCGCAA AGGAGCCGCT
GCACCCGAAG CGGCAGGAGC CATTCACTCC GATTTTGAAA AAGGGTTTAT TCGTGCGGAA
GTAATGTATT ATAAAGATTT GCTGGAGCTT GGTTCGGAAC ACAAAGTAAA AGAAGCAGGC
AAACTTCGCT CCGAAGGCAA AGAGTACATT GTGCGCGATG GCGACATTAT TGTGTTCCGC
TTTAACGTTT AG
|
|---|
| Protein sequence | MSLRCGIVGL PNVGKSTLFN AITAKQAEAA NYPFCTIEPN VGTVLVPDER MQQIANVVKT
PTLVPAVLEI VDIAGLVKGA SKGEGLGNQF LSHIREVDAI VHVVRCFEDE NIIHVQGKID
PVDDIATIET ELMLADLDSM ERRMDRLRKN VRKEKELQQQ VDVAEKIIAA LSEGTPVRKI
LETPEEQQIA KQFFLISSKP ILFAANVAEG DLPNGNAHTA KVAEIAAEHG AKMIIISAKT
EAEIAELPEE ERPEFLESLG LHSSGLDRLI QSAHDLLGLQ TYFTAGEKEV HAWTIRKGAA
APEAAGAIHS DFEKGFIRAE VMYYKDLLEL GSEHKVKEAG KLRSEGKEYI VRDGDIIVFR
FNV
|
|---|
| |