| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0183 |
|---|
| Symbol | clpX |
|---|
| ID | 3747709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 206164 |
|---|
| End bp | 207495 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637772710 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_378504 |
|---|
| Protein GI | 78188166 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC AAGAACCGGG AAAAGGTAGA ACTCGCACGA ATAAAAACGA TACAGCAAAT
GTTTTTTGCT CATTTTGTGG GCGTCCAGCT TACGAAGTTG GTAGCATGGT TGCAGGACCG
AACGTCTTTA TTTGCGACCG CTGCATAGCC GCTGCAAACG ATGTGCTTTT ACACCAAACA
GGCAACGCAC CACAACCTCA GCAACCAGAA CCATCGGCAC CCATCTCCAA TCAACCATTT
TTTCCCCGCC TTGTTAGCCC CAAAGCTATT GTAGATGTGC TCGACCAATA TGTTGTTGGG
CAAGAACGTG CTAAAAAATC GCTTGCCGTA GCCGTCTATA ACCACTACAA GCGCATTGAA
TCGCACAATA CAAGTGCCGC ATTAGATGAA GTGGTGATTG AAAAAAGCAA CATTTTGCTT
TTGGGACCAA CAGGCACCGG AAAAACCTTG CTTGCCCAAA CGCTTGCAAA TTTGCTTGAT
GTGCCATTCT CCATTGTTGA TGCCACCTCG CTTACCGAAG CAGGATATGT TGGCGATGAC
GTTGAAACCA TTCTTGCACG CCTACTACAC GCCTCCGACT TTGACCTTGA GCGCACCGAA
CGCGGCATTA TTTATGTTGA TGAAATTGAT AAAATTGCCC GCAAATCAGC CAACGTTTCC
ATTACACGCG ACGTTTCAGG CGAAGGCGTT CAGCAAGGAT TATTAAAAAT TCTTGAAGGC
GCGGTTGTTG GCGTTCCCCC AAAAGGCGGA CGCAAGCACC CCGAACAACC ACTCATTAAC
GTTAACACCA AAAACATCCT CTTTATTTGT GGAGGAGCTT TTGAAGGCAT TGATAAGATT
ATTGCACGCC GCGTTTCAAA ATCATCCATG GGCTTTGGCG CTAAAGTAAA AAGCAGCAGC
ATGGATTACG ATCCTGATAT TTTACGCCAA GTAATGCAAG ACGATCTGCA CGAATATGGG
CTAATCCCAG AGTTTATTGG TCGCCTACCC GTTATTTCAA CGCTTGATAT GCTTGATGAA
AAAGCGCTGC ACAACATTTT AGTAGAACCA AAAAACGCCA TTACCAAGCA GTACAAAAAG
CTCTTTGATA TGGATGGCGT AGAGCTTGAA TTTACCGATG AAGCGCTTGA AAAGGTAGTG
AACATTGCCA AAGAGCGAGG CACAGGCGCA CGCGCCCTCC GCTCAGTGCT TGAAAGTGTG
ATGATTGACA TTATGTACGA AATTCCCTCA ATGAAGGAGA CGCACAAGTG CATTGTTACG
GCTGAAACCA TTGAACAAAA AACGCCGCCC GAGTACATCA GCGAAGCCAA TACCACCAAG
AAAAGTGCAT AA
|
|---|
| Protein sequence | MKTQEPGKGR TRTNKNDTAN VFCSFCGRPA YEVGSMVAGP NVFICDRCIA AANDVLLHQT
GNAPQPQQPE PSAPISNQPF FPRLVSPKAI VDVLDQYVVG QERAKKSLAV AVYNHYKRIE
SHNTSAALDE VVIEKSNILL LGPTGTGKTL LAQTLANLLD VPFSIVDATS LTEAGYVGDD
VETILARLLH ASDFDLERTE RGIIYVDEID KIARKSANVS ITRDVSGEGV QQGLLKILEG
AVVGVPPKGG RKHPEQPLIN VNTKNILFIC GGAFEGIDKI IARRVSKSSM GFGAKVKSSS
MDYDPDILRQ VMQDDLHEYG LIPEFIGRLP VISTLDMLDE KALHNILVEP KNAITKQYKK
LFDMDGVELE FTDEALEKVV NIAKERGTGA RALRSVLESV MIDIMYEIPS MKETHKCIVT
AETIEQKTPP EYISEANTTK KSA
|
|---|
| |