| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0176 |
|---|
| Symbol | |
|---|
| ID | 3747702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 196403 |
|---|
| End bp | 198628 |
|---|
| Gene Length | 2226 bp |
|---|
| Protein Length | 741 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637772703 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_378497 |
|---|
| Protein GI | 78188159 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAG TATGGCGCAC TATAGCCCTG TTTCTCTTTT GTGCCTCTCC GTTACATGGT
GAAGAGGTGG CAACGGTGCC CACTCCACCA TCTATCCAAA AAGCAACGCA ACCCCATCCC
TACGTTAATA CCATTCGCAT TAGCGGCAAT AAAGCTATTT CCGAAGAGGA GTTACGGTTG
ATTATTAGCA CACGAGCACA TAAATCGTTT TTTGGGAGTG GCTTATTTGG AGGTGCTAAA
AAAGCTTTTA ATGCCGAAGA GTTTGAACGT GATATTTTCC TTATTAAAAA ACTCTACACC
TATAAAGGCT ACTTTGCGGC TGAAGTTGAT ACCACCATTA CACGCCTCTC AAAAGGCAAA
AAGGTAAATC TTGCCATTCG CATTAAAGAG CATCAACCCG CCCGTATTGA TACGTTACGC
TATTTTGGAT TAGAAAAAGT GCCCGAACGA CTTGAAAAAA AGTTCTTAGC AGAAAGCCGT
TTGCAGGTTG GCAAAATTTT TTCGGTAGAG CAATTAATTG AAGAGCGCGA TCGCTCACTC
AATTTTTTTA GGGAGCAAGG TTATACTTTT TTTCATGAGG ATAGTATTCG CGTGAAGGTG
GATACTGTTG GCACCCATGC AGGCATTGCA ATGAACTTCC ATTTGCCTGA ACGGTTGCAA
TACGCGCCAA TTCATGCAGT TGTGCAAAAT TCGCGCCGCA ACGAAAAAAA GCCTCGTGAG
CAAACGTTTC AGCTTGAGGG CATTCATGGC AAAGTAATTG GACGGCAACG CATTAACCCT
GAACTTATTA CAACGGCGGT AGCTTTTCGC CAGGGGCAAT ACACCAGCCA AAGCAAAGAG
CAACGCACCT TGCAAAATCT TGGAGCCACC AACGTCTTTT CGTCGCTCTC CATTACCCCC
GACTCGGTAC GCTCAGGATT GCTTTACACC ACCATTAGCT TAGAAGCAGC TCCAAAGCAT
GAACTTGCCC CCAAAATATT AGTGGATAAC CGTTATGGTC CCCTCTTTTT TGGTGGCTCA
ATGGCATACG AAAACAAAAA TTTGCTGGGG CGTGGCGAGC AATTACGTTT AAGTGCTAAC
TACGGCACTC AAATTGAGAA AAAAAGTAGT CTGCTCTCAA ACCTTGCCCC CTCAGAATAT
GATGCCTTTA ACCCTTACGA CTTTAGCGTT AAAAGCACCT TAGTTCGCCC TGTTTCAAAG
CAAAATGGCA ATTACTACTC TACCACTATT GAGTACGCTA CCACCAAACA ACCGGTACTC
CTTTCAAACC GTAACGCTTT AATTCGGGCA ACTTACAACG CCAAGCTTGG AAGCACCTCC
CGCTTAAACT TCGACTTTTT TGATGTTGAA TGGGTGCAAA AAGATTCTTT ACGAGGCTTT
AAACCATTGT TTCAAAAAGA GCTTGCCACC AACATTGGCA TTGATCCCAC CAACGATGCC
GCCATTAACG CTGGTATTGA TAGCTTAGTA AGCACACACT TTAACCAAAC GTTCCGCTTG
CGCTACCAAT CCAAAAGCAA ACCGCGAAGC GAAACGCAAA TTGGTAGAAC CCTTTGGAAC
ACCGATTTAC TGTTGGAGGA ATCAGGTAGC CTTGCATGGC TTGTTGACCG TTACTTAGAT
ACCAGTCGCC GTAACGGCTT TACCAGCAAC GATCCGCAAA TTTTTGGCAC CGCCTATTCA
CAATATCTCA AACTTGAAAG CGGCGTAAGC TTTGTGAACC TGAGCACCAC CAATAGCCAA
TTTGCCGGCA GAATACGCGC AGGATGGATG GCTCCGTATG GCAAAGCAAC CGCAACGCCT
GAAGAGCGGC GATTTTATGC AGGTGGCGCT AACGATTTAC GTGGATGGAT TTTTGGCACG
CTGGGACCGG GTAAAAACCG CAGCGAAGCC ACAGCAAACT TTGGTGCCAA TATTAAGCTT
ACCACATCTC TTGAATATCG GCTTAAGTTC TTTCGCTTTT TAAACCAGCC ATCAGGCATT
ACCTTTTTTA CCGATGCTGG CAACATTTGG GATAATGATG GCACGTATGG CTTCAACAGC
AAGAGCCTTT TTCGCGATAT GGCTTGGGAT GCTGGGGCTG GCTTACGGCT TGGCTCTCCT
ATTGGTCCAC TACGTTTTGA TATAGCCTAT AGGCTGCATG ACCCCACTCA AGCGCACCCT
TGGCAGCTCA AACATCTTAA TGGAAGCGAC TACACCTTTA CGTTTGGTAT TGGTGAAGCT
TTTTAA
|
|---|
| Protein sequence | MKKVWRTIAL FLFCASPLHG EEVATVPTPP SIQKATQPHP YVNTIRISGN KAISEEELRL
IISTRAHKSF FGSGLFGGAK KAFNAEEFER DIFLIKKLYT YKGYFAAEVD TTITRLSKGK
KVNLAIRIKE HQPARIDTLR YFGLEKVPER LEKKFLAESR LQVGKIFSVE QLIEERDRSL
NFFREQGYTF FHEDSIRVKV DTVGTHAGIA MNFHLPERLQ YAPIHAVVQN SRRNEKKPRE
QTFQLEGIHG KVIGRQRINP ELITTAVAFR QGQYTSQSKE QRTLQNLGAT NVFSSLSITP
DSVRSGLLYT TISLEAAPKH ELAPKILVDN RYGPLFFGGS MAYENKNLLG RGEQLRLSAN
YGTQIEKKSS LLSNLAPSEY DAFNPYDFSV KSTLVRPVSK QNGNYYSTTI EYATTKQPVL
LSNRNALIRA TYNAKLGSTS RLNFDFFDVE WVQKDSLRGF KPLFQKELAT NIGIDPTNDA
AINAGIDSLV STHFNQTFRL RYQSKSKPRS ETQIGRTLWN TDLLLEESGS LAWLVDRYLD
TSRRNGFTSN DPQIFGTAYS QYLKLESGVS FVNLSTTNSQ FAGRIRAGWM APYGKATATP
EERRFYAGGA NDLRGWIFGT LGPGKNRSEA TANFGANIKL TTSLEYRLKF FRFLNQPSGI
TFFTDAGNIW DNDGTYGFNS KSLFRDMAWD AGAGLRLGSP IGPLRFDIAY RLHDPTQAHP
WQLKHLNGSD YTFTFGIGEA F
|
|---|
| |