Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_R0034 |
Symbol | |
ID | 8336818 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6294294 |
End bp | 6297425 |
Gene Length | 3132 bp |
Protein Length | |
Translation table | |
GC content | 58% |
IMG OID | 644958562 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0351192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0184688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCAAGTTTTT AAGGGCGCAC GGTGGATGCC TTGGCACCAG GAGCCGATGA AGGACGTGGT AGACCGCGAA AGGCCTCGGG GAGCTGTCAA ACGAGCTGTG ATCCGAGGGT GTCCGAATGG GGGAACCCGG CCGTATGTGA GTGCGGTCAC CCACGCCTGA ATATATAGGG CGTGTGGAGG GAACGACGGG AAGTGAAACA TCTCAGTACC GTCAGGAAGA GAAAACAACA GTGATTCCGG GAGTAGTGGC GAGCGAAACC GGATGAGGCT AAACCGTTTG CGTGTGATAC CCGGCAGGGG TTGCGCAGGC GGGGTCGTGG GACTTTTCTA TCAGGTCTGC CGGTCTGGTA CAGAGTAAGA AACCAGTTGT GTAGTCGAAG GCGATGCGAA AGCGCCGGCA TAGTGGGTAA TACCCCCGTA GACGAAACAT GGCTGGCTCT GGAGAAGTAT CCCAAGTAGC ACGGGGCCCG AGAAATCCCG TGTGAATCTG GCGGGACCAC CCGCTAAGCC TGAATACTCC CTGGTGACCG ATAGCGGACT AGTACCGTGA GGGAAAGGTG AAAAGTACCC CGGGAGGGGA GTGAAAGAGT ACCTGAAACC GTGTGCCTAC AAGCCGTGGG AGCTCCGCCA GGCCGGATTT ATCCGGTTCT GGTCGTGACC GCGTGCCTTT TGAAGAATGA GCCTGCGAGT TAGCGTTGTG TGGCGAGGTT AACCCGGGTG GGGTAGCCGT AGCGAAAGCG AGTCCGAATA GGGCGTTTGA GTCGCATGAC CTAGACCCGA AGCGTGGTGA TCTAGCCATG GGCAGGGTGA AGCGCGGGTA AGACCGCGTG GAGGCCCGAA CCCACCAGGG TTGAAAACCT GGGGGATGAC CTGTGGTTAG GGGTGAAAGG CCAATCAAAC CACGTGATAG CTGGTTCTCC CCGAAATGCA TTTAGGTGCA GCGTCGTGTG TTTCTTCCCG GAGGTAGAGC ACTGGATGGT CTAGGGGGCC TACAAGCTTA CCGAAATCAG CCAAACTCCG AATGCCGGTG AAGTGATAGC GCGGCAGTGA GACGGCGGGG GATAAGCTTC GTCGTCGAGA GGGAAACAGC CCAGAACACC GGCTAAGGCC CCTAAGCGTG TGCTAAGTGG GAAAGGATGT GGAGTCGCAT AGACAACCAG GAGGTTGGCT TAGAAGCAGC CACCCTTGAA AGAGTGCGTA ATAGCTCACT GGTCAAGTGA TTCCGCGCCG ACAATGTAGC GGGGCTCAAG TACACCGCCG AAGCCGTGTC ATTCATACAT GAAGCCCGTC GCCCTAGTAA GGTGGCCAGG CGTATGGATG GGTAGGGGAG CGTCGTGCAG CCAGTGAAGT CCCGGGGTGA CCCAGGGGTG GAGGCTGCAC GAGTGAGAAT GCAGGCATGA GTAGCGAATG CGACGTGAGA AACGTCGCCG CCGGATGACC AAGGGTTCCT GGGCCAGGCT AATCCGCCCA GGGTGAGTCG GGACCTAAGG CGAGGCCGAC AGGCGTAGTC GATGGACAAC GGGTTGATAT TCCCGTACCC GCGAAGGTCC GCCCCATGTT GAGCCGGACG ATGCTAAACC CGTTAAGCCC CCTGACGCCT TCGGGTGTTG GGTGTGGTGG AGCCGGTGAC CCGAGTCCGT AGTAGGCAAG CGATGGTGTG ACGCAGGAAG GTAGCCCAAC CCGGGCGGTG GTTGTCCCGG GGTAAGGATG TAGGACGTAC GGTAGGCAAA TCCGCCGTGC ATATAGTCTG AGATCTGATG CCGAGCCCGT AGGGGCGAAG TGGGTGATCC TATGCTGCCG AGAAAAGCAT CTAGCGAGGA CCAAGCGGCC CGTACCCCAA ACCGACACAG GTGGTCAGGT AGAGAATACC GAGGCGATCG GGTGAACCGT GGTTAAGGAA CTCGGCAAAA TACCTCCGTA ACTTCGGGAG AAGGAGGGCT CTCTTTGGTG AACACCCTTG CGGTGTGAGC TGGGGGGAGT CGCAGAGACC AGCGAGAAGC GACTGTTTAC TAAAAACACA GGTCCGTGCG AAGTCGCAAG ACGATGTATA CGGACTGACG CCTGCCCGGT GCTGGAACGT TAAGGGGACC GGTTAGGAAG CGATTCCGAA GCTGAGAACT TAAGCGCCAG TAAACGGCGG TGGTAACTAT AACCATCCTA AGGTAGCGAA ATTCCTTGTC GGGTAAGTTC CGACCTGCAC GAATGGCGTA ACGACTTCTC GACTGTCTCA ACCACGGACC CGGCGAAATT GCACTACGAG TAAAGATGCT CGTTTCGCGC AGCAGGACGG AAAGACCCCA GGACCTTCAC TATAGCTTGA TATTGGTGTT CGACTCGGTT TGTGTAGGAT AGGTGGGAGG CTGTGAAGTC CGGACGCTAG TTCGGGTGGA GCCGGCGTTG AAATACCACT CTGATCGTGT TGGATGTCTA ACCTCGGTCC GTGATCCGGA TCAGGGACAG TGTCTGGTGG GTAGTTTAAC TGGGGCGGTT GCCTCCTAAA GAGTAACGGA GGCGCCCAAA GGTTCCCTCA GCCTGGTTGG CAATCAGGTG GCGAGTGCAA GTGCACAAGG GGGCTTGACT GTGAGACCGA CAGGTCGAGC AGGTGCGAAA GCAGGGACTA GTGATCCGGC CATGGCTTGT GGAAGCGTGG TCGCTCAACG GATAAAAGGT ACCCTGGGGA TAACAGGCTG ATCTTCCCCA AGAGTCCATA TCGACGGGAT GGTTTGGCAC CTCGATGTCG GCTCGTCGCA TCCTGGGGCT GGAGTAGGTC CCAAGGGTTG GGCTGTTCGC CCATTAAAGC GGTACGCGAG CTGGGTTTAG AACGTCGTGA GACAGTTCGG TCCCTATCCG CTGCGCGCGC AGGAGACTTG AGAAGGGCTG TCCCTAGTAC GAGAGGACCG GGATGGACGG ACCTCTGGTG TGCCAGTTGT TCTGCCAAGA GCATGGCTGG TTGGCTACGT TCGGGAAGGA TAACCGCTGA AAGCATCTAA GCGGGAAACC TGCTTCAAGA TGAGGTCTCC CACCCACTTG ATGGGGTAAG GCTCCCGGTA GACCACCGGG TTGATAGGCC GGGCGTGGAA GCATCGTGAG GTGTGGAGCG GACCGGTACT AATAGGCCGA GGGCTTGACC AC
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Protein sequence | |
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