Gene Caci_9054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_9054 
Symbol 
ID8340449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10466814 
End bp10467218 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content66% 
IMG OID644962146 
Productprotein of unknown function DUF37 
Protein accessionYP_003119708 
Protein GI256398144 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00509296 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.587556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACG TGTTGATGGG GCTGATCCGG CTCTACCAGA TAGTCTTGAG CCCGGTCGTC 
AACTGGCGCG GCCCGGTGTG CAAGTTCGAG CCGTCCTGCT CCCACTACGG CTATGACGCT
GTGCGGATCC ATGGGGCGAT CAAGGGCGGC GGCATGACCG TGTGGCGGGT GCTGCGCTGC
AATCCGTGGA GTTCGGGCGG GTACGATCCC GTCAAGCCCC GCAAGACCCG CGGGTCGGGT
GGCGAAAAAG ACGGCCAGGC GCGGAACCTC TCGCCGGAGC AGACGAGTTC CCCTGGTGAT
GACACACAGA CTTCCGACCG GACTGAAATG GTCGGTTTGC CCACTGAGCC GGCCCGCCCC
GCGGTCCGGC CCGACCTGAT GTCCAGCCGA GGAGCGCGAT CGTGA
 
Protein sequence
MKYVLMGLIR LYQIVLSPVV NWRGPVCKFE PSCSHYGYDA VRIHGAIKGG GMTVWRVLRC 
NPWSSGGYDP VKPRKTRGSG GEKDGQARNL SPEQTSSPGD DTQTSDRTEM VGLPTEPARP
AVRPDLMSSR GARS